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PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005

PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005. Cindy Zheng Pacific Rim Application and Grid Middleware Assembly San Diego Supercomputer Center University of California, San Diego. http://pragma-goc.rocksclusters.org. PRAGMA Grid Testbed. UZurich, Switzerland. NCSA, USA.

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PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005

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  1. PRAGMA Grid Testbed&Routine-basis ExperimentsMay – October 2005 Cindy Zheng Pacific Rim Application and Grid Middleware Assembly San Diego Supercomputer Center University of California, San Diego http://pragma-goc.rocksclusters.org

  2. PRAGMA Grid Testbed UZurich, Switzerland NCSA, USA KISTI, Korea CNIC, China UMC, USA AIST, Japan GUCAS, China SDSC, USA TITECH, Japan UoHyd, India NCHC, Taiwan CICESE, Mexico KU, Thailand ASCC, Taiwan UNAM, Mexico USM, Malaysia BII, Singapore MU, Australia UChile, Chile http://pragma-goc.rocksclusters.org

  3. PRAGMA Grid resourceshttp://pragma-goc.rocksclusters.org/pragma-doc/resources.html

  4. QMMDhttp://pragma-goc.rocksclusters.org/applications/qmmd/qmmd_requirement.htmlQMMDhttp://pragma-goc.rocksclusters.org/applications/qmmd/qmmd_requirement.html • Quantum mechanics application • Ninf-G based • Driver: Hiroshi Takemiya (AIST) • Running on 6+4 sites for 5 days • Ready on 12 sites: • AIST: Yoshio Tanaka, Yusuke Tanimura • ASCC: Hurng-Chun Lee, Mike Chiang • CNIC: Kai Nan, Kevin Dong • KISTI: Jysoo Lee, Jae-Hyuck Kwak • KU: Somsak Sriprayoonsakul, Sugree Phatanapherom • NCHC: Weicheng Huang, Chien-Lin Huang • NCSA: Radha Nandkumar, Tom Roney • SDSC: Mason Katz, Cindy Zheng • TITECH: Satoshi Matsuoka, Hitoshi Aoki • UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon • UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy • USM(hawk): Habibah Wahab, Suhaini Ahmad

  5. Savannahhttp://pragma-goc.rocksclusters.org/applications/savannah/default.htmlSavannahhttp://pragma-goc.rocksclusters.org/applications/savannah/default.html • Wildfire simulation • Nimrod/G based • Driver: Colin Enticott (MU) • Ready on 10 sites: • AIST: Yoshio Tanaka, Yusuke Tanimura • ASCC: Hurng-Chun, Lee, Mike Chiang • KISTI: Jysoo Lee, Jae-Hyuck Kwak • KU: Sugree Phatanapherom, Somsak Sriprayoonsakul • MU: David Abramson • NCHC: Weicheng Huang, Chien-Lin Huang • NCSA: Radha Nandkumar, Tom Roney • SDSC: Mason Katz, Cindy Zheng • TITECH: Satoshi Matsuoka, Hitoshi Aoki • UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon • UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy

  6. Gfarmhttp://pragma-goc.rocksclusters.org/applications/gfarm/gfarm.htmlGfarmhttp://pragma-goc.rocksclusters.org/applications/gfarm/gfarm.html • Gfarm – grid virtual file system • Development lead:Osamu Tatebe(AIST) • Ready on 7 sites: • AIST: Yusuke Tanimura, Yoshio Tanaka • ASCC: Mike Chiang, Hurng-Chun, Lee • KISTI: Jae-Hyuck Kwak, Jysoo Lee • NCHC: Chien-Lin Huang, Weicheng Huang • NCSA: Tom Roney, Radha Nandkumar • SDSC: Cindy Zheng, Mason Katz • TITECH: Hitoshi Aoki, Satoshi Matsuoka

  7. Community Scheduling Frameworkhttp://pragma-goc.rocksclusters.org/softdepot/zding_csf.ppt • Interface GT4 and local schedulers • Implementation and deployment lead: XiaoHui Wei and ZhaoHui Ding (JLU) • Supported by: • SDSC: Wilfred Li, Cindy Zheng • AIST: Yoshio Tanaka PBS PBS CSF SGE 4 SGE PBS 2 4 3

  8. iGAPhttp://pragma-goc.rocksclusters.org/applications/igap/igap.htmliGAPhttp://pragma-goc.rocksclusters.org/applications/igap/igap.html • Genome annotation pipeline • Use CSF/Gfarm • Driver: Wilfred Li (SDSC) • Ready on 7 sites: • AIST: Yoshio Tanaka, Yusuke Tanimura • ASCC: Hurng-Chun Lee, Mike Chiang • KISTI: Jysoo Lee, Jae-Hyuck Kwak • NCHC: Weicheng Huang, Chien-Lin Huang • NCSA: Radha Nandkumar, Tom Roney • SDSC: Mason Katz, Cindy Zheng • TITECH: Satoshi Matsuoka, Hitoshi Aoki

  9. SCMSWebhttp://pragma-goc.rocksclusters.org/scmsweb/ • Grid monitoring + accounting • Development lead: KU: Putchong Uthayopas, Somsak Sriprayoonsakul, Sugree Phatanapherom • Collaborations: • Solaris porting at CICESE: Raul Hazas, Areli Garcia • IA64 porting at CNIC: Kevin Dong • Deployed on 15 sites: • AIST: Yoshio Tanaka, Yusuke Tanimura • ASCC: Hurng-Chun Lee, Mike Chiang • BII: Stephen Wong, Damien Leong Wye Kit • CICESE: Raul Hazas, Salvador Castaneda, Julian Delgado • CNIC: Kai Nan, Kevin Dong • KISTI: Jysoo Lee, Jae-Hyuck Kwak • KU: Sugree Phatanapherom, Somsak Sriprayoonsakul • NCHC: Weicheng Huang, Chien-Lin Huang • NCSA: Radha Nandkumar, Tom Roney • SDSC: Mason Katz, Cindy Zheng • TITECH: Satoshi Matsuoka, Hitoshi Aoki • UChile: Alejandro Jofre, Juan Carlos Maureira • UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon • UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy • USM(hawk): Habibah Wahab, Suhaini Ahmad

  10. MOGAShttp://ntu-cg.ntu.edu.sg/pragma/gridacctinfo • Grid accounting system • Development lead: NTU – Francis Lee, Junwei Lee • Deployed on 7 sites: • AIST: Yoshio Tanaka, Yusuke Tanimura • KISTI: Jysoo Lee, Jae-Hyuck Kwak • NCSA: Radha Nandkumar, Tom Roney • SDSC: Mason Katz, Cindy Zheng • TITECH: Satoshi Matsuoka, Hitoshi Aoki • UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon • USM(hawk): Habibah Wahab, Suhaini Ahmad

  11. Grid-enabling Applications • Ocean science (CICESE, Mexico) • IGrid05 demo Raul Hazas, Luis Farfán, Salvador Castaneda, Julian Delgado • GAMESS/APBS (UZurich, Switzerland) Kim Baldridge, Celine Amoreira • FLARM, Drug-design (CNIC, China) Bin Shen, Kevin Dong • San Andreas Fault simulation (iGEON) Mian Liu (UMC), Huai Zhang (GUCAS)

  12. Ninf-G/NMI/Rocks Integration • Ninf-G-2.4/NMI • Lead integrators: • Yoshio Tanaka (AIST) • Mats Rynge (NMI) • Ninf-G 2.4 Rocks Roll • Lead integrators: • Mason Katz (SDSC) • Yoshio Tanaka (AIST)

  13. GAMA/Naregi-CA Integration • Naregi-CA - certificate authorization system • Gama - trust management system • Collaborators: • Naregi, Japan • Shinichi Mineo • Takto Okuno • SDSC, USA • Sandeep Chandra • Kurt Mueller • Mason Katz • Cindy Zheng GAMA

  14. Network Measurementshttp://pragma-goc.rocksclusters.org/pragma-grid-status/testbed_amp.htm • Deployed NLANR AMP to all testbed sites • AMP data map on pragma-goc • AMP map software • PRIME project • AMP data interface • Collaborators: • NLANR: Tony McGregor, Ronn Ritke, Bud Hale, Jeremy Kallstrom • UCSD: Peter Arzberger, Cindy Zheng, John Lee • CNIC: Kai Nan, Kevin Dong • UChile: Alejandro Jofre, Juan Carlos Maureira • UoHyd: Arun Agarwal, Vinod Kumar • USM(hawk): Suhaini Ahmad, Habibah Wahab, Ruzaimi Azizan • UZurich: Kim Baldrige, Wibke Sudholt

  15. Group paper Issues and Methods for Building a Multi-Application International Grid Resource Cindy Zheng, Mason Katz, Peter Arzberger, Philip M. Papadopoulos University of California, San Diego, USA Yoshio Tanaka, Yusuke Tanimura, Osamu Tatebe National Institute of Advanced Industrial Science and Technology, Japan David Abramson, Colin Enticott, Slavisa Garic, Shahaan Ayuub Monash University, Australia Putchong Uthayopas, Somsak Sriprayoonsakul, Sugree Phatanapherom Kasetsart University, Thailand Jae-Hyuck Kwak Korea Institute of Science and Technology Information, Korea

  16. Thank you http://pragma-goc.rocksclusters.org

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