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UPPMAX and UPPNEX: Enabling high performance bioinformatics

UPPMAX and UPPNEX: Enabling high performance bioinformatics

UPPMAX and UPPNEX: Enabling high performance bioinformatics. Ola Spjuth, UPPMAX. o la.spjuth@farmbio.uu.se. High-performance bioinformatics. Trivial/embarrassingly parallelizable Mass of individual tasks (or divide up problems), run in parallel E.g. analyze several sequences

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419 views • 21 slides
Biosciences Working Group Update

Biosciences Working Group Update

Biosciences Working Group Update. Wilfred W. Li, Ph.D., UCSD, USA Habibah Wahab, Ph.D., USM, Malaysia Seok Jong Yu, Ph.D. , KISTI, Korea Hosted by Kasetsart University Bangkok, Thailand March 20-22, 2012. Rocks BioApp.

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246 views • 17 slides
Biosciences Working Group Update

Biosciences Working Group Update

Biosciences Working Group Update. Wilfred W. Li, Ph.D., UCSD, USA Habibah Wahab, Ph.D., USM, Malaysia Seok Jong Yu, Ph.D. , KISTI, Korea Hosted by Kasetsart University Bangkok, Thailand March 20-22, 2012. Rocks BioApp.

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264 views • 17 slides
Dr. Eitan Rubin Bioinformatics analysis of (human) variation

Dr. Eitan Rubin Bioinformatics analysis of (human) variation

Dr. Eitan Rubin Bioinformatics analysis of (human) variation. Sequence analysis & genetic. Phenotypic. Data mining in clinical records Predicting X-years risk Complications of diabetes Age & laboratory tests & disease. Precision cancer medicine

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220 views • 2 slides
GBrowse2 Saturday 4:00-4:15, Lincoln Stein, part of BOSC SIG

GBrowse2 Saturday 4:00-4:15, Lincoln Stein, part of BOSC SIG

GMOD @ ISMB 2010. Analysis and Workflow. Galaxy: Analyze, Visualize, Communicate Saturday 1:30-5:30, Galaxy Team NGS Analysis with Galaxy on the Cloud Monday 3:30-3:55, TT26, Anton Nekrutenko Sample Tracking and automated data processing in Galaxy for NGS

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143 views • 1 slides

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