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Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( ??? ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan WWW: http://www.csie.ntu.edu.tw/~kmchao. Useful Websites. MIT Biology Hypertextbook http://www.mit.edu:8001/afs/athena/course/other/esgbio/www/7001main.html

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555 views • 45 slides

Alignment methods

Alignment methods. Introduction to global and local sequence alignment methods Global : Needleman-Wunch Local : Smith-Waterman Database Search BLAST FASTA. Why search sequence databases?. I have just sequenced something. What is known about the thing I sequenced?

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613 views • 32 slides

Alignment methods II

Alignment methods II. April 24, 2007 Learning objectives- 1) Understand how Global alignment program works using the longest common subsequence method. 2) Understand how Local alignment program works. Homework 3 and 4 due today Quiz on Thursday. Why search sequence databases?.

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426 views • 29 slides

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Simple scoring scheme - PowerPoint PPT Presentation

Sequence Alignment

Alignment methods

Alignment methods II