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Archie Campbell Data Analyst / Programmer Generation Scotland University of Edinburgh

IWPLS'09 - International Workshop on Portals for Life Sciences Generation Scotland Data Access Portal. Archie Campbell Data Analyst / Programmer Generation Scotland University of Edinburgh. Dave Liewald Informatics R&D Manager Generation Scotland CCACE Database Manager

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Archie Campbell Data Analyst / Programmer Generation Scotland University of Edinburgh

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  1. IWPLS'09 - International Workshop on Portals for Life SciencesGeneration Scotland Data Access Portal Archie Campbell Data Analyst / Programmer Generation Scotland University of Edinburgh Dave Liewald Informatics R&D Manager Generation Scotland CCACE Database Manager Centre for Cognitive Ageing and Cognitive Epidemiology University of Edinburgh

  2. Who is Generation Scotland? • University of Edinburgh (IGMM/MMC) • University of Dundee (Health Informatics Centre) • University of Glasgow (Robertson Centre) • University of Aberdeen (Foresterhill Health Centre) • NHS Scotland (Information Services Division) • Not forgetting… 17,322+ volunteers

  3. What does Generation Scotland do? Generation Scotland aims to: • Recruit a prospective, intensively phenotyped family based cohort and associated control sample sets • Identify genetic contributions to complex disease & related quantitative traits • Apply genomics, bioinformatics and systems biology to public health for the diagnosis, prognosis & prevention of ill health • Act as a platform for translational research, rational drug discovery & clinical trials Generation Scotland aims to create more effective treatments based on gene knowledge. www.generationscotland.org

  4. GS Projects

  5. GS Data Access Portal: Constraints • Money • Time • Ability • Project Structure

  6. GS Data Access Portal: Technology • Web server – MS Windows Server 2003 • Web front end – Joomla CMS template • Application layer - Borland Delphi (Intraweb) • Back end database - MySQL

  7. GS Data Access Portal: Overview • Data Viewers • Documentation • Collaboration Proposals

  8. GS Data Access Portal: Acknowledgements Generation Scotland: Robin Morton Pamela Linksted Shona Kerr Lynne Hope Prof. David Porteous CCACE: Dave Liewald Prof. Ian Deary NeSC Edinburgh Any Questions?

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