1 / 9

Databases

Databases. Sequence and Bibliographic Genomic Clinical and Mutation Homologies Integrated Most databases are accessible from a web page are interlinked. Types of Database. Main nucleic acid sequence databases EMBL GenBank DDBJ Main protein sequence databases Swiss Prot

Patman
Download Presentation

Databases

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. Databases

  2. Sequence and Bibliographic Genomic Clinical and Mutation Homologies Integrated Most databases are accessible from a web page are interlinked Types of Database

  3. Main nucleic acid sequence databases EMBL GenBank DDBJ Main protein sequence databases Swiss Prot also TREMBL, GenPept Often integrated with other databases Sequence Databases

  4. Entrez Links nucleic acid sequences, protein sequences and MEDLINE Powerful and easy to use SRS Universal system for searching sequence and other databases Available worldwide including at HGMP Integrating Sequence and Bibliographic Databases

  5. GDB Repository for mapping and genomic data for the Human Genome Project Powerful; links to other databases ACeDB Developed to provide access to C.elegans data Genomic Databases

  6. OMIM Online Mendelian Inheritance in Man Database of disease-linked genes and associated phenotypes Links to Entrez, GDB and other databases HGMD Database of sequences and phenotypes of disease-causing mutations Disease-specific mutation databases Clinical and Mutation Databases

  7. MGI Mapping and gene expression data for the mouse Human homologies Links to GDB and Entrez Many other organism-specific databases can be used to search for homologs of human genes Homology Databases

  8. GeneCards Integrated resource of information on human genes and their products Major emphasis on human disease Links to many kinds of biomedical information Sequence databases OMIM, HGMD, MDB Doctors’ Guide to the Internet An Integrated Database

  9. Look for links to Help or Examples Try Boolean searches Be careful with UK/US spelling differences leukaemia vs leukemia haemoglobin vs hemoglobin colour vs color Database Searching Tips

More Related