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Quorum Sensing. Stephanie Lo, 23 July 07. Review. Some Lessons Learned. Growth of bacteria only minimally affected by plate reader cover; much less drying out Condensation = problem for accuracy? Random wavelengths to measure growth did not work 360/420; 790/850. Biobricks. Senders.
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Quorum Sensing Stephanie Lo, 23 July 07
Some Lessons Learned • Growth of bacteria only minimally affected by plate reader cover; much less drying out • Condensation = problem for accuracy? • Random wavelengths to measure growth did not work • 360/420; 790/850
Biobricks Senders Receiver S03623 I13507 T9002 I13507 S03608
Experiment Details • Grew up liquid cultures of overnight sender (SI) and receiver (T02) • Dilution with LB to same OD • Innoculate with different dilutions of sender to receiver • Manually use plate reader to measure fluorescence (RFP and GFP) and OD • Shake plate at 37 degrees between reads
Specifics • Experiment A and B were run manually, C was overnight • Initial ODs around 0.5 (Experiment A and C) and 0.25 (Experiment B)
Correlation of RFP to Sender (SI) growth over small OD rangeWhat we expect to see RFP (RFU) OD
RFP (RFU) versus OD Experiment A
RFP versus time … Experiment A
OD versus Time Experiment A
GFP fluorescence vs time Experiment B
RFP versus time Note the time lag until substantial RFP Experiment C
Fluorescence vs. Timeovernight, 7/16 Initial OD = 0.055
What we’d like to see – Quorum Activity GFP fluorescence per receiver (T02) cell OHHL concentration / Sender (SI) amount added / RFP fluorescence
Detecting a Quorum System Against a Control GFP fluorescence per OD Quorum system Noninduced (actual) Noninduced (ideal) time
GFP Fluorescence vs. Time Experiment A
GFP versus Sender Added Experiment A
GFP Fluorescence per Sender Normalized for Number of Receiver Cells Experiment B
GFP per Receiver Cell at One Hour Experiment C
Absolute GFP vs Time Experiment C
GFP per receiver vs. time Experiment C
In the future: Characterize JT system as well? • Dilute samples to maintain relatively constant ODs / number of cells • Determine percent fluorescent through FACS or fluorescence microscope Percentage cells fluorescent OD