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Bioinformatics & GCAT-SEEK Vince Buonaccorsi Juniata College

Bioinformatics & GCAT-SEEK Vince Buonaccorsi Juniata College. Goal: Facilitate massively parallel sequencing projects involving faculty teaching undergrads in their area of interest Listserv F aculty development workshops Group discounts with sequencing facilities

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Bioinformatics & GCAT-SEEK Vince Buonaccorsi Juniata College

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  1. Bioinformatics & GCAT-SEEK Vince BuonaccorsiJuniata College • Goal: Facilitate massively parallel sequencing projects involving faculty teaching undergrads in their area of interest • Listserv • Faculty development workshops • Group discounts with sequencing facilities • Pooled runs outside workshop • Write labs and data, web posting • Increase access to computational resources

  2. Bioinformatic Approaches: Euk Genomics • Genome Assembly: Unix - Quake, SOAPdenovo2 • Genome Annotation: Unix - Maker • Genome Comparison: Web - CoGe, InParanoid • RADseq: Unix - Stacks, R

  3. Juniata/HHMI Certificate in Genomics, Ethics and Society • Four required core courses • Genomics, ethics and society • Basic molecular biology, genetics, and genomics • Statistics • Informatics (traditional CSor CURE-style classes) • Any three elective courses related to ELSI genomic themes from: • Science and Human Values • Judgment & Decision Making • Medicine, Doctors, and Russian Literature • Leadership in the 21rst Century/Executive leadership • Social History of Medicine • Medieval Medicine

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