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CQoS Update

CQoS Update. Li Li, Boyana Norris , Lois Curfman McInnes Argonne National Laboratory Kevin Huck University of Oregon. Outline. Interfaces and components for Performance database management CQoS parameters PerfExplorer and ongoing work on CQoS analysis components. CQoS-Enabled

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CQoS Update

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  1. CQoS Update Li Li, Boyana Norris, Lois Curfman McInnes Argonne National Laboratory Kevin Huck University of Oregon

  2. Outline • Interfaces and components for • Performance database management • CQoS parameters • PerfExplorer and ongoing work on CQoS analysis components

  3. CQoS-Enabled Component Application Component Substitution Set Substitution Assertion Database Component A Component B Component C Analysis Infrastructure Performance monitoring, problem/solution characterization, and performance model building Control Infrastructure Interpretation and execution of control laws to modify an application’s behavior Instrumented Component Application Cases Control System (parameter changes and component substitution) Scientist can provide decisions on substitution and reparameterization Performance Databases (historical & runtime) Interactive Analysis and Model Building Scientist can analyze data interactively

  4. Outline • Motivation • Introduction to components for high-performance computing and computational quality of service (CQoS) architecture • Database component design • Application examples • Ongoing and future work

  5. CQoS Database Component Design • Designed SIDL interfaces for CQoS database management • Implemented prototype database management components • Description and software:http://wiki.mcs.anl.gov/cqos/index.php/CQoS_database_components_version_0.0.0 • Based on PerfDMF performance data format and PERI metadata formats • Comparator interface and corresponding component for searching and matching parameter sets

  6. CQoS Database Component Design … … Perf. data: query/store Perf. Database Metadata: query/store Meta-Database Adaptive Heuristic Metadata: compare/match Meta-Comparator Perf. data: compare/match Perf. Comparator : component … … : component connection Fig.1. Connect database and comparator components to adaptive heuristics component. There can be multiple database and comparator components that deal with different data types.

  7. CQoS Performance and Metadata • Performance (general) • Historical performance data from different instances of the same application or related applications: • Obtained through source instrumentation, e.g., TAU (U. Oregon) • Binary instrumentation, e.g., HPCToolkit (Rice U.) • Ideally, for each application execution, the metadata should provide enough information to be able to reproduce a particular application instance. Examples: • Input data (reduced representations) • Matrix properties, condition number • Algorithmic parameters • Convergence tolerance, CFL number, maximum number of iterations • System parameters • Compilers, hardware • Domain-specific • Provided by scientist/algorithm developer

  8. Outline • Motivation • Introduction to components for high-performance computing and computational quality of service (CQoS) architecture • Database component design • Application examples • Ongoing and future work

  9. 1T. S. Coffey, C.T. Kelley, and D.E. Keyes. Pseudo-transient continuation and differential algebraic equations. SIAM J. Sci. Comp, 25:553–569, 2003. Database Component Application – Example 1: 2D Driven Cavity Flow1 • Linear solver: GMRES(30), vary only fill level of ILU preconditioner • Adaptive heuristic based on: • Matrix properties (which change during runtime) computed with Anamod (Eijkhout, http://sourceforge.net/projects/salsa/)

  10. How Database Components Work? • During runtime, the driver (e.g., linear solver proxy component) evaluates important matrix properties, and matches the properties to historical data in MetaDB through PropertyComparator interfaces. • Linear solver performance data is retrieved and compared given the current matrix properties. This is accomplished by the PerfComparator component. • The linear solver parameters resulting in the best performance, in this case fill level of ILU preconditioner, is returned back to the driver. • The driver adapts accordingly to continue execution.

  11. Example 2: Parallel Mesh Partitioning in Combustion Simulations1 • J. Ray et al. (Sandia) have developed a CCA toolkit for flame simulations using structured adaptive mesh partitioning (SAMR). No single partitioner is optimal; thus, CQoS support for choosing an efficient meta-partitioner and an appropriate configuration for a given mesh is desirable. • Meta-partitioner related information includes: • Algorithm (i.e. partitioner) settings • E.g., actual_levels, good_enough, smoothing, maxNRLoadImbalance • Problem (mesh) characterization • E.g., number of levels, amount of refined area per level • Performance metrics • E.g., synchronization cost statistics, data migration cost statistics 1J. Steensland and J. Ray, "A Partitioner-Centric Model for SAMR Partitioning Trade-Off Optimization : Part I," International Journal of High Performance Computing Applications, 2005, 19(4):409-422.

  12. Meta-Partitioner Example1 1Johan Steensland and Jaideep Ray, "A Partitioner-Centric Model for SAMR Partitioning Trade-Off Optimization: Part I", Proceedings of the 4th Annual Symposium of the Los Alamos Computer Science Institute (LACSI04). 2004.

  13. Database Components for SAMR Partitioner

  14. How Database Components Work? • The CharacterizationComparator component matches current AMR grid characterization against historical data in MetaDB to find and extract the most similar previously encountered state • For the returned state, we choose an appropriate rule that matches the state to an optimal partitioner • How are the rules constructed? • The performance of various partitioners are compared for a given grid characterization • The performance comparison takes into account the offset among different metrics • A rule is created to map the grid state to a best-performed partitioner setting • These are accomplished through the PerformanceComparator and AlgorithmComparator components • The rule maps the current grid state to an optimal partitioner • The main driver adapts to the new partitioner to continue simulation.

  15. Ongoing and Future Work (Incomplete List) • Validate current algorithm/solver selection strategies with application experiments • Incorporate more offline performance analysis capabilities (machine learning, statistical analysis, etc.) • Introduce a lightweight runtime database to avoid overhead of accessing SQL databases (should only access database in the beginning and after the end of the main computation) • Apply to more problem domains, implementing extensions as necessary • Integration of ongoing efforts in • Performance tools: common interfaces and data representaion (leverage PERI tools, PerfExplorer, TAU performance interfaces, and other efforts) • Numerical components: emerging common interfaces (e.g., TOPS solver interfaces) increase choice of solution method  automated composition and adaptation strategies

  16. Acknowledgements to Collaborators • Victor Eijkhout, the University of Texas at Austin • Jaideep Ray, Sandia National Laboratory • Henrik Johansson, Uppsala University, Department of Information Technology, Sweden

  17. Thank you!

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