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Screenshots of Mutation Impact Ontology for Literature Mining

Screenshots of Mutation Impact Ontology for Literature Mining. http://datam.i2r.a-star.edu.sg/mstrap/ A WORKFLOW FOR MUTATION EXTRACTION AND STRUCTURE ANNOTATION http://www.worldscinet.com/jbcb/05/0506/S0219720007003119.html. A. B. Mutant Locus : wNmP

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Screenshots of Mutation Impact Ontology for Literature Mining

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  1. Screenshots of Mutation Impact Ontology for Literature Mining http://datam.i2r.a-star.edu.sg/mstrap/ A WORKFLOW FOR MUTATION EXTRACTION AND STRUCTURE ANNOTATION http://www.worldscinet.com/jbcb/05/0506/S0219720007003119.html

  2. A B Mutant Locus: wNmP where w is wildtype, m is the mutant residue, N is position of the wildtype and P is its actual position in the sequence.

  3. Modifications to the Ontology: 2008 • An 'Identifier' class is created to capture • the different kinds of id's under one • superclass: • PubMed_ID => for grounding literature • UniProt_ID => for grounding protein names • GenBank_ID => for protein sequence • PDB_ID => for structure • Cosmic_ID => for grounding mutations • LiteratureSpecification now allows for • capturing different kinds of documents, • and also publication date. Both Sentences • and paragraphs can now be instantiated. Ontology Version2.0 • Impact details now appear under • ImpactSpecification'

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