1 / 8

Affymetrix microarray analysis by using Cmap

Affymetrix microarray analysis by using Cmap. By NFU Biology Algorithm lab. What is Connectivity Map.

dewitt
Download Presentation

Affymetrix microarray analysis by using Cmap

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. Affymetrix microarray analysis by using Cmap By NFU Biology Algorithm lab

  2. What is Connectivity Map • The Connectivity Map is a collection of genome-wide transcriptional expression data from cultured human cells treated with bioactive small molecules and simple pattern-matching algorithms. • The discovery of functional connections between drugs, genes and diseases through the transitory feature of common gene-expression changes.

  3. DEMO Step 1: Register as a new user .

  4. DEMO(Cont) Step 2: Click the quick query

  5. DEMO(Cont) Step 3 : upload the up tag and down tag file The tag file type has been Affymetrix microarray id and Change the file extension to “.grp”

  6. Result Step 4: Click view results now.

  7. Result(cont) Download result form here Drug name Drug name and cell with cancer type Cancer type

  8. Thanks For Watching Producer by National Formosa University Biology Algorithm lab

More Related