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Grid Networks

Grid Networks. UMICH. GMU. UAH. UARK. UVA. GPN. USC. DUKE. SC. TTU. GaTech. TACC. UAB. GSU. Tulane. LSU. SURAGrid. UNC-C also a member. See presentation on Nov 22, 2005 from SURAGrid team. Interesting Grid Applications. Environment/Earth.

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Grid Networks

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  1. Grid Networks

  2. UMICH GMU UAH UARK UVA GPN USC DUKE SC TTU GaTech TACC UAB GSU Tulane LSU SURAGrid UNC-C also a member See presentation on Nov 22, 2005 from SURAGrid team.

  3. Interesting Grid Applications

  4. Environment/Earth

  5. Earth Science Gridhttps://www.earthsystemgrid.org/ • Producing, archiving, and providing access to climate data that informs research on global climate change. This image displays data from ESG and shows sea ice extent (white/gray), sea ice motion, sea surface temperatures (colors), and atmospheric sea level pressure (contours). ESG uses Globus software for security, data movement, and system monitoring. Image provided by UCAR.

  6. http://www.grid.unep.ch/

  7. http://www.worldcommunitygrid.org/

  8. http://www.worldcommunitygrid.org/

  9. Medicine/Biology

  10. http://www.ediamond.ox.ac.uk/

  11. http://www.openmolgrid.org/

  12. http://www.qub.ac.uk/escience/dev/article.php?tag=genegrid_summaryhttp://www.qub.ac.uk/escience/dev/article.php?tag=genegrid_summary

  13. DNA as a linear array

  14. Sequence alignment problem • Sequences used to find biologically meaning relationships among organisms • Evolutionary information • Determining diseases, causes, cures • Finding out information about proteins • Problem especially compute intensive for long sequences • Needleman and Wunsch (1970) - optimal global alignment • Smith and Waterman (1981) - optimal local alignment • Taylor (1987) - multiple sequence alignment by pairwise alignment • BLAST trades off optimal results for faster computation • Challenge - achieve optimal results without sacrificing speed

  15. http://www.volunteersoaz.org/information/?NavPageID=47985

  16. https://www.ud.com/company/news/files/2004_11_nytimes.pdf#search='grid%20computing%20genes'https://www.ud.com/company/news/files/2004_11_nytimes.pdf#search='grid%20computing%20genes'

  17. http://www.technologyreview.com/articles/05/02/wo/wo_hoffman020105.asphttp://www.technologyreview.com/articles/05/02/wo/wo_hoffman020105.asp

  18. http://www.grid.org/projects/hpf/about.htm

  19. http://www.inq7.net/inf/2003/jun/27/text/inf_6-1-p.htm

  20. Engineering

  21. http://www.geodise.org/

  22. Physics

  23. http://www.nsc.liu.se/ngssc-grid/hep-nielsen.pdf

  24. Modeling Black Holes Cactuscode.org • Einstein’s equations of General Relativity: Gab = 0 • One of the most complex set of equations in physics • Mixed hyperbolic-elliptic initial value problem • 3 Dimensional, multiple scales • 12 or more equations, with thousands of terms • Require diverse distributed collaborations & many large scale simulations: • Parallelization, optimization • Parallel IO, data management, viz • Checkpointing, steering, interaction t=100 t=0

  25. http://www.fusiongrid.org/

  26. http://www.gridpp.ac.uk/

  27. http://www.ppdg.net/

  28. http://www.grace-ist.org/

  29. Workflow

  30. http://kepler-project.org/

  31. Using Distributed Experimental Equipment in a Grid Infrastructure

  32. http://www.gridbus.org/vlab/

  33. Data grids

  34. http://eu-datagrid.web.cern.ch/eu-datagrid/

  35. http://oodt.jpl.nasa.gov/oodt-site/index.html

  36. http://www.ogsadai.org.uk/

  37. Grid computing project using MPI

  38. http://www.dma.unina.it/~murli/GridSummerSchool2005/repository/thursday-21/gridschool-present-050716.pdfhttp://www.dma.unina.it/~murli/GridSummerSchool2005/repository/thursday-21/gridschool-present-050716.pdf

  39. Grid computing courses

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