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LOCtree: prediction of protein subcellular localization

LOCtree: prediction of protein subcellular localization. Summary of subcellular localization prediction using LOCkey. Protein Identifier. Predicted localization. Confidence. Alternative prediction. C onfidence of alternative localization predictions. AtMPK6. Nuclear. 93. -. -.

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LOCtree: prediction of protein subcellular localization

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  1. LOCtree: prediction of protein subcellular localization Summary of subcellular localization prediction using LOCkey Protein Identifier Predicted localization Confidence Alternative prediction Confidence of alternative localization predictions AtMPK6 Nuclear 93 - - OsSIPK Nuclear 93 - - Summary of subcellular localization prediction using LOCtree Protein Identifier Predicted localization Reliability index Intermediate localization prediction (output of different SVMs in hierarchical tree) Reliability index of intermediate localization predictions AtMPK6 Not DNA-binding 5 Not secreted,Nuclear,Not DNA-binding 5,9,10 OsSIPK Not DNA-binding 5 Not secreted,Nuclear,Not DNA-binding 5,10,9 http://cubic.bioc.columbia.edu/cgi/var/nair/loctree/query Supplementary Figure 1 Mi-Ok et al.

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