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Explore the thermodynamic and kinetic constraints on redox reactions catalyzed by microbial populations. Observe the growth and decay of different strains in pure cultures and mixed communities while considering the competition for substrates. Analyze the rate limitations and the shift from biomass-limited to thermodynamically and kinetically limited reactions.
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Config→ Redox couples… Decouple redox pairs for electron donating and accepting half reactions
add → Kinetic → Microbial reaction Type out redox reaction catalyzed by the microbe Enter thermodynamic constraints and kinetic parameters
Kinetics of microbially catalyzed reaction Rate is initially biomass limited, but increases with biomass growth until thermodynamic and kinetic limitations develop.
Growth and decay of microbial populations Biomass increases rapidly, then slowly declines as decay outpaces growth
Thermodynamic constraints on reaction Reaction proceeds uninhibited initially but rate slows primarily due to thermodynamic limitations.
Two microbial populations Identify each microbial population with a label and reaction. Microbes can compete for common substrates or catalyze different reactions. In this example, two different strains, (one fast, the other efficient) growing in a chemostat catalyze the same reaction. They differ in their kinetic and growth parameters.
Pure cultures and mixed communities The rapidly metabolizing strain grows fastest initially, but with time is replaced by the more efficient strain.