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This resource explains the importance of using RDF to carry metadata for datasets in OpenDAP, including solving structural issues and supporting different languages. It also discusses the benefits of RDF in mapping different data models and enhancing the metadata mapping process.
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Using Resource Description Framework (RDF) to carry metadata for datasets M.Benno Blumenthal and John del Corral International Research Institute for Climate and SocietyOpenDAP 2007 http://iridl.ldeo.columbia.edu/ontologies/
RDF is important for OpenDAP because • By embedding OpenDAP in an RDF document, metadata (a.k.a. attributes) not understood by OpenDAP code are easily carried in a semantically-valid way • Explicit relationships between OpenDAP variables can cleanly solve netcdf common name vs OpenDAP GRID/MAP structures, while avoiding retransmission of common independent variables • Explicit mapping between the different data models of the different OpenDAP APIs
RDF is important for OpenDAP because • Support for different languages can be built on top of RDF object support, e.g. Ruby ActiveRDF
Why RDF? Web-based system for interoperating semantics A key part of the Semantic Web RDF/OWL is an interesting technology, but it is even more interesting when it is clear that it can help solve our problems
Standard Metadata Standard Metadata Schema/Data Services Datasets Tools Users
StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema Datasets Datasets Datasets Datasets Datasets Tools Tools Tools Tools Tools Users Users Users Users Users Many Data Communities
StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema Datasets Datasets Datasets Datasets Datasets Tools Tools Tools Tools Tools Users Users Users Users Users Super Schema Standard metadata schema
StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema Datasets Datasets Datasets Datasets Datasets Tools Tools Tools Tools Tools Users Users Users Users Users Super Schema: direct Standard metadata schema/data service
Flaws • A lot of work • Super Schema/Service is the Lowest-Common-Denominator • Science keeps evolving, so that standards either fall behind or constantly change
StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema Datasets Datasets Datasets Datasets Datasets Tools Tools Tools Tools Tools Users Users Users Users Users RDF Standard Data Model Exchange Standard metadata schema RDF RDF RDF RDF RDF RDF
RDF RDF RDF RDF RDF StandardMetadataSchema StandardMetadataSchema StandardMetadataSchema StandardMetadataSchem StandardMetadataSchema RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF Datasets Datasets Datasets Datasets Datasets Tools Tools Tools Tools Tools Users Users Users Users Users RDF Data Model Exchange Standard metadata schema RDF
queries queries queries RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF Architecture Virtual (derived) RDF
Why is this better? • Maps the original dataset metadata into a standard format that can be transported and manipulated • Still the same impedance mismatch when mapped to the least-common-denominator standard metadata, but • When a better standard comes along, the original complete-but-nonstandard metadata is already there to be remapped, and “late semantic binding” means everyone can use the new semantic mapping • Can uses enhanced mappings between models that have common concepts beyond the least-common-denominator • EASIER – tools to enhance the mapping process, mappings build on other mappings
CF attributes NC basic attributes IRIDL attributes SWEET Ontologies CF Standard Names CF Standard Names As Terms IRIDL Terms SWEET as Terms Search Terms Gazetteer Terms
Sample Tool: Faceted Search http://iridl.ldeo.columbia.edu/ontologies/query2.pl?...
Distinctive Features of the search • Search terms are interrelated • terms that describe the set of returns are displayed (spanning and not) • Returned items also have structure (sub-items and superseded items are not shown)
Architectural Features of the search • Multiple search structures possible • Multiple languages possible • Search structure is kept in the database, not in the code http://iridl.ldeo.columbia.edu/ontologies/query2.pl
RDF: framework for writing connections Triplets of • Subject • Property (or Predicate) • Object URI’s identify things, i.e. most of the above Namespaces are used as a convenient shorthand for the URI’s
Datatype Properties {WOA} dc:title “NOAA NODC WOA01” {WOA} dc:description “NOAA NODC WOA01: World Ocean Atlas 2001, an atlas of objectively analyzed fields of major ocean parameters at monthly, seasonal, and annual time scales. Resolution: 1x1; Longitude: global; Latitude: global; Depth: [0 m,5500 m]; Time: [Jan,Dec]; monthly”
Object Properties {WOA} iridl:isContainerOf {Grid-1x1}, {Grid-1x1} iridl:isContainerOf {Monthly}
Standard Properties {WOA} dcterm:hasPart {Grid-1x1}, {Grid-1x1} dcterm:hasPart {MONTHLY} Alternatively {WOA} iridl:isContainerOf {Grid-1x1}, {iridl:isContainerOf} rdfs:subPropertyOf {dcterm:hasPart}
netcdf/CF in RDF Object properties provide a framework for explicitly writing down relationships between data objects/components, e.g. vague meaning of nesting is made explicit Properties also can be related, since they are objects too {SST} rdf:type {cfatt:non_coordinate_variable}, {SST} cfatt:standard_name {cf:sea_surface_temperature}, {SST} netcdf:hasDimension {longitude}
RDF Tools • Transport/Exchange (RDF/XML) • Storage • RDF APIs (Redland,Jena,Sesame) • Query (SPARQL,SeRQL, …) • Basic Semantics
Search Interface Term • http://iri.columbia.edu/~benno/sampleterm.pdf
Ontologies Use Conventions to connect concepts to established sets of concepts Generate additional “virtual” triples from the original set and semantics RDFS – some property/class semantics OWL – additional property/class semantics: more sophisticated (ontological) relationships
OWL Language for expressing ontologies, i.e. the semantics are very important. However, even without a reasoner to generate the implied RDF statements, OWL classes and properties represent a sophistication of the RDF Schema However, there is a serious split in world view from what we have been talking about: concepts as classes vs concepts as individuals
Search Interface • Items (datasets/maps) • Terms • Facets • Taxa
Search Interface Semantic API {item} dc:title dc:description rss:link iridl:icon dcterm:isPartOf {item2} dcterm:isReplacedBy {item2} {item} trm:isDescribedBy {term} {term} a {facet} of {taxa} of {trm:Term}, {facet} a {trm:Facet}, {taxa} a {trm:Taxa}, {term} trm:directlyImplies {term2}
Faceted Search w/Queries http://iridl.ldeo.columbia.edu/ontologies/query2.pl?...
queries queries queries RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF RDF Architecture Virtual (derived) RDF
IRI RDF Architecture Data Servers MMI Ontologies JPL bibliography Start Point Standards Organizations RDF Crawler Location Canonicalizer RDFS Semantics Owl Semantics SWRL Rules SeRQL CONSTRUCT Time Canonicalizer Sesame Search Queries Search Interface
CF attributes NC basic attributes IRIDL attributes SWEET Ontologies CF Standard Names CF Standard Names As Terms IRIDL Terms SWEET as Terms Search Terms Gazetteer Terms
RDF is important for OpenDAP because • By embedding OpenDAP in an RDF document, metadata (a.k.a. attributes) not understood by OpenDAP code are easily carried in a semantically-valid way • Explicit relationships between OpenDAP variables can cleanly solve netcdf common name vs OpenDAP GRID/MAP structures, while avoiding retransmission of common independent variables • Explicit mapping between the different data models of the different OpenDAP APIs • Build on language support of RDF objects
Topics/Issues • OpenDAP and RDF: can we transport data semantics without fixing the entire schema? • netcdf/HDF and RDF: do we need non-contextual modeling in our metadata transport/storage? • Concepts as classes vs concepts as individuals • Sub-classes vs sub-categories