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Threeway analysis. Batch organic synthesis. Paul Geladi. Head of Research NIR CE Chairperson NIR Nord Unit of Biomass Technology and Chemistry Swedish University of Agricultural Sciences Umeå Technobothnia Vasa paul.geladi @ btk.slu.se paul.geladi @ syh.fi. THREE-WAY ARRAY. K.
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Threeway analysis Batch organic synthesis
Paul Geladi Head of Research NIRCE Chairperson NIR Nord Unit of Biomass Technology and Chemistry Swedish University of Agricultural Sciences Umeå Technobothnia Vasa paul.geladi @ btk.slu.se paul.geladi @ syh.fi
THREE-WAY ARRAY K C = time B = variable J A = batch I
Literature Geladi P. & Åberg P., Three-way modeling of a batch organic synthesis process monitored by near infrared spectroscopy, Journal of Near Infrared Spectroscopy, 9, 1-9, 2001 Geladi P. & Forsström J., Monitoring of a batch organic synthesis by infrared spectroscopy: modeling and interpretation of three-way data, Journal of Chemometrics, 16, 329-338, 2002.
Three-way arrays • GC-MS • LC-UV • Fluorescence • Batch processing • many others
Properties • Components / pseudorank • 3 types, not 2 • No orthogonality • Parsimonious model
BATCH REACTION • ester synthesis by refluxing alcohol and acid • many batches as experimental design • measure NIR spectrum with transflectance fiberoptic probe at regular intervals • 400-2500 nm every 2 nm, 32 scans average • reference = air
REACTION C5H11OH + CH3COOH -> C5H11OCOCH3 + H2O -acid catalysis H+ -remove water to shift equilibrium
Parsimony = not using too many model parameters = no overfitting 10 Stations x 13 Variables x 22 Times 2 Components MODEL PARAMETERS PCA1 10x286 20 + 572 = 592 PCA2 13x220 26 + 440 = 466 PCA3 22x130 44 + 260 = 304 PARAFAC 20 + 26 + 44 = 92
IMPORTANT QUESTIONS - can we learn something about reaction kinetics? - can we see difference between batches? - can we interpret the spectra? - how does it all fit together?
REACTION 1 14 x 701 x 13 array. Source of SS % explained Rank 3 model 97.1 Residual 2.9 Total 100 Component 1 48.0 Component 2 15.3 Component 3 4.0
REACTION 2 6 x 40 x 776 array number %SS SS 1 62 2.73 2 18 0.78 3 16 0.71 4 3.2 0.14 Model 99.2 4.38 Residual 0.8 0.038 Total 100 4.42
a1 block effect Batch # Fig 10.51
Component size 6 5 4 3 2 1 0 3 5 1 2 4 0 Pseudorank Fig 10.55
Bias Wavelength