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Chapter 17 Glycolysis. Plays a key role in energy metabolism by providing significant portion of energy utilized by most organisms. Glucose + 2 NAD + + 2 ADP + 2 Pi 2 Pyruvate + 2 NADH + 2 ATP. Ethanol Fermentation. Lactic Acid Fermentation. From Lehninger Principles of Biochemistry.
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Chapter 17 Glycolysis • Plays a key role in energy metabolism by providing significant portion of energy utilized by most organisms Glucose + 2 NAD+ + 2 ADP + 2 Pi 2 Pyruvate + 2 NADH + 2 ATP
Ethanol Fermentation Lactic Acid Fermentation From Lehninger Principles of Biochemistry
Degradation of glucose via the glycolytic pathway Stage I: Reactions 1 – 5 Stage II: Reactions 6 – 10
From Lehninger Principles of Biochemistry
From Lehninger Principles of Biochemistry
glucose glucose 6-phosphate fructose 6-phosphate fructose 1,6-bisphosphate glyceraldehyde 3-phosphate + dihydroxyacetone phosphate C6H7O(OH)5 = C6H12O6 Non-Redox -OH + OPO32- isomerization -OH + OPO32- C6H7O(OH)3(OPO32-) 2 = C6H10O4(OPO32-) 2 cleavage 2 C3H5O2(OPO32-) From Lehninger Principles of Biochemistry
Step 1: Phosphorylation of Glucose Nucleophilic attack of the C6 –OH group of glucose on the g phosphate of an Mg-ATP .. First ATP Utilization Kinase: Enzyme that transfers phosphoryl groups between ATP & metabolite From Lehninger Principles of Biochemistry
Yeast Hexokinase without glucose Yeast Hexokinase with glucose 2 lobes come together to engulf the substrate
Induced Fit in Hexokinase Closing of the 2 lobes places ATP in close proximity to the C6 –OH group & excludes water from the active site D-glucose Glucose induces a large conformational change in hexokinase Substrate induced conformational change is responsible for the enzyme’s specificity From Lehninger Principles of Biochemistry
Step 2: Conversion of glucose 6-phosphate to fructose 6-phosphate From Lehninger Principles of Biochemistry
Reaction mechanism of phosphoglucose isomerase The active site catalytic residues BH+ Lys B’ His-Glu dyad
Step 3: Phosphorylation of fructose 6-phosphate to fructose 1,6-bisphosphate Second ATP utilization From Lehninger Principles of Biochemistry
Step 4: Cleavage of fructose 1,6-bisphosphate Mechanism of base-catalyzed aldol cleavage Aldol condensation occurs by the reverse mechanism
From Lehninger Principles of Biochemistry
From Lehninger Principles of Biochemistry
From Lehninger Principles of Biochemistry
Step 5: Interconversion of the triose phosphates From Lehninger Principles of Biochemistry
From Lehninger Principles of Biochemistry
Redox 1,3-bisphosphoglycerate 3-phosphoglycerate glyceraldehyde 3-phosphate pyruvate 2-phosphoglycerate phosphoenolpyruvate From Lehninger Principles of Biochemistry
NAD+/NADH From Lehninger Principles of Biochemistry
NAD+ + H -NADH or NAD+ + H + + 2e- NADH Step 6: Oxidation of glyceraldehyde 3-phosphate to 1,3 bisphosphoglycerate Compound with high phosphate group-transfer potential • NAD+ is the primary oxidizing agent of glycolysis • If NAD+ runs out, glycolysisstops! From Lehninger Principles of Biochemistry
The enzymatic mechanism of glyceraldehyde 3-phosphate dehydrogenase NAD+ is the oxidizing agent Substrate is oxidized Sulfhydryl group
Step 7: Phosphoryl transfer from 1,3-bisphosphoglycerate to ADP First ATP generation From Lehninger Principles of Biochemistry
Yeast phosphoglycerate kinase (bilobal structure) Upon substrate binding the 2 domains of PGK swing together so as to permit the substrates to react in a water free environment (as occurs with hexokinase)
Step 8: Conversion of 3-phosphoglycerate to 2-phosphoglycerate From Lehninger Principles of Biochemistry
Step 9: Dehydration of 2-phosphoglycerate to phosphoenolpyruvate From Lehninger Principles of Biochemistry
Step 10: Transfer of a phosphoryl group from PEP to ADP From Lehninger Principles of Biochemistry
Phosphoenolpyruvate , PEP From Lehninger Principles of Biochemistry
Standard state conditions Reactions 1-10 are glucose to pyruvate and reaction 11 is pyruvate to lactate. At concentrations in RBC From Lehninger Principles of Biochemistry
Glycolysis does not require O2 from air, but it does require the oxidant NAD+ Ethanol fermentation in yeast and other microorganisms Lactic acid fermentation in several types of animal cells and some microorganisms From Lehninger Principles of Biochemistry