1 / 39

CS 140 : Non-numerical Examples with Cilk++

CS 140 : Non-numerical Examples with Cilk++. Divide and conquer paradigm for Cilk++ Quicksort Mergesort. Thanks to Charles E. Leiserson for some of these slides. Work and Span (Recap). T P = execution time on P processors. T 1 = work. T ∞ = span *. Speedup on p processors

hanne
Download Presentation

CS 140 : Non-numerical Examples with Cilk++

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. CS 140 : Non-numerical Examples with Cilk++ Divide and conquer paradigm for Cilk++ Quicksort Mergesort Thanks to Charles E. Leiserson for some of these slides

  2. Work and Span (Recap) TP = execution time on P processors T1 = work T∞= span* Speedup on p processors • T1/Tp Parallelism • T1/T∞ * Also called critical-path length or computational depth.

  3. Scheduling Cilk++ allows the programmer to express potential parallelism in an application. The Cilk++schedulermaps strands onto processors dynamically at runtime. Since on-lineschedulers are complicated, we’ll explore the ideas with an off-linescheduler. Memory I/O Network … P P P P $ $ $

  4. Greedy Scheduling IDEA: Do as much as possible on every step. Definition:A strand isreadyif all its predecessors have executed.

  5. Greedy Scheduling IDEA: Do as much as possible on every step. Definition:A strand isreadyif all its predecessors have executed. P = 3 Completestep • ≥ P strands ready. • Run any P.

  6. Greedy Scheduling IDEA: Do as much as possible on every step. Definition:A strand isreadyif all its predecessors have executed. P = 3 Completestep • ≥ P strandsready. • Run any P. Incompletestep • < P strands ready. • Run all of them.

  7. Analysis of Greedy Theorem [G68, B75, BL93]. Any greedy scheduler achieves TP T1/P + T∞. P = 3 Proof. • # complete steps  T1/P, since each complete step performs P work. • # incomplete steps  T∞, since each incomplete step reduces the span of the unexecuted dag by 1. ■

  8. Optimality of Greedy Corollary. Any greedy scheduler achieves within a factor of 2 of optimal. Proof. Let TP* be the execution time produced by the optimal scheduler. Since TP* ≥ max{T1/P, T∞} by the Work and Span Laws, we have TP ≤ T1/P + T∞ ≤ 2⋅max{T1/P, T∞} ≤ 2TP* . ■

  9. Linear Speedup Corollary.Any greedy scheduler achieves near-perfect linear speedup whenever P ≪ T1/T∞. Proof. Since P ≪ T1/T∞ is equivalent to T∞ ≪ T1/P, the Greedy Scheduling Theorem gives us TP ≤ T1/P + T∞ ≈ T1/P . Thus, the speedup is T1/TP ≈ P. ■ Definition.The quantity T1/PT∞ is called the parallel slackness.

  10. Sorting • Sorting is possibly the most frequently executed operation in computing! • Quicksort is the fastest sorting algorithm in practice with an average running time of O(N log N), (but O(N2) worst case performance) • Mergesort has worst case performance of O(N log N) for sorting N elements • Both based on the recursive divide-and-conquer paradigm

  11. Parallelizing Quicksort • Serial Quicksort sorts an array S as follows: • If the number of elements in S is 0 or 1, then return. • Pick any element vin S. Call this pivot. • Partition the set S-{v} into two disjoint groups: • S1 = {x  S-{v} | x  v} • S2 = {x  S-{v} | x  v} • Return quicksort(S1)followed byv followed by quicksort(S2) Not necessarily so !

  12. Parallel Quicksort (Basic) template <typename T> void qsort(T begin, T end) { if (begin != end) { T middle = partition( begin, end, bind2nd( less<typenameiterator_traits<T>::value_type>(), *begin ) ); cilk_spawnqsort(begin, middle); qsort(max(begin + 1, middle), end); cilk_sync; } } The second recursive call to qsort does not depend on the results of the first recursive call We have an opportunity to speed up the call by making both calls in parallel.

  13. Performance • ./qsort 500000 -cilk_set_worker_count 1 >> 0.122 seconds • ./qsort 500000 -cilk_set_worker_count 4 >> 0.034 seconds • Speedup = T1/T4 = 0.122/0.034 = 3.58 • ./qsort 50000000 -cilk_set_worker_count 1 >> 14.54 seconds • ./qsort 50000000 -cilk_set_worker_count 4 >> 3.84 seconds • Speedup = T1/T4 = 14.54/3.84 = 3.78

  14. Measure Work/Span Empirically • cilkscreen -w ./qsort 50000000 >> Sorting 50000000 integers >> work: 29696503161 instructions >> span: 5828326145 instructions >> parallelism: 5.1 • cilkscreen -w ./qsort 500000 >> Sorting 500000 integers >> work: 261593480instructions >> span: 62178133instructions >> parallelism: 4.2

  15. Analyzing Quicksort 56 13 31 21 45 34 32 14 78 Quicksort recursively 13 14 21 31 32 34 45 56 78 13 14 21 31 32 34 45 56 78 Assume we have a “great” partitioner that always generates two balanced sets

  16. Analyzing Quicksort • Work: T1(n) = 2T1(n/2) + Θ(n) 2T1(n/2) = 4T1(n/4) + 2 Θ(n/2) …. …. n/2 T1(2) = n T1(1) + n/2 Θ(2) T1(n) = Θ(n lg n) • Span recurrence: T∞(n) = T∞(n/2) + Θ(n) Solves to T∞(n) = Θ(n) + Partitioning not parallel !

  17. Parallelism: T1(n) = Θ(lg n) T∞(n) Analyzing Quicksort Not much ! • Indeed, partitioning (i.e., constructing the array S1 = {x  S-{v} | x  v})can be accomplished in parallel in time Θ(lg n) • Which gives a span T∞(n) = Θ(lg2n ) • And parallelismΘ(n/lg n) • Basic parallel qsort can be found under$cilkpath/examples/qsort • Parallel partitioning might be a final project Way better !

  18. The Master Method (Optional) The Master Methodfor solving recurrences applies to recurrences of the form T(n) = aT(n/b) + f(n), where a ≥ 1, b > 1, and fis asymptotically positive. * Idea:Compare nlogba with f(n). * The unstated base case is T(n) = (1)for sufficiently small n.

  19. Master Method — CASE 1 T(n) = a T(n/b) + f(n) nlogba≫ f(n) Specifically, f(n) = O(nlogba – ε) for some constant ε > 0 . Solution: T(n) = Θ(nlogba) .

  20. Master Method — CASE 2 T(n) = a T(n/b) + f(n) nlogba≈ f(n) Specifically, f(n) = Θ(nlogbalgkn)for some constant k ≥ 0. Solution:T(n) = Θ(nlogbalgk+1n)) . Ex(qsort): a =2, b=2, k=0  T1(n)=Θ(n lg n)

  21. Master Method — CASE 3 T(n) = a T(n/b) + f(n) nlogba≪ f(n) Specifically,f(n) = Ω(nlogba + ε)for some constant ε > 0,andf(n) satisfies the regularity conditionthat a f(n/b) ≤ c f(n)for some constant c < 1. Solution:T(n) = Θ(f(n)) . Example: Span of qsort

  22. Master Method Summary T(n) = a T(n/b) + f(n) CASE 1:f(n) = O(nlogba – ε), constant ε > 0  T(n) = Θ(nlogba) . CASE 2:f(n) = Θ(nlogba lgkn), constant k  0 T(n) = Θ(nlogba lgk+1n) . CASE 3:f(n) = Ω(nlogba + ε), constant ε > 0, and regularity condition  T(n) = Θ(f(n)) .

  23. MERGESORT • Mergesort is an example of a recursive sorting algorithm. • It is based on the divide-and-conquer paradigm • It uses the merge operation as its fundamental component (which takes in two sorted sequencesandproduces a single sorted sequence) • Simulation of Mergesort • Drawback of mergesort: Not in-place (uses an extra temporary array)

  24. Merging Two Sorted Arrays 3 12 19 46 4 14 21 23 template <typename T> void Merge(T *C, T *A, T *B, intna, intnb) { while (na>0 && nb>0) { if (*A <= *B) { *C++ = *A++; na--; } else { *C++ = *B++; nb--; } } while (na>0) { *C++ = *A++; na--; } while (nb>0) { *C++ = *B++; nb--; } } Time to merge n elements = Θ(n). 3 12 19 46 4 14 21 23

  25. Parallel Merge Sort 3 4 12 14 19 21 33 46 3 12 19 46 4 14 21 33 3 19 12 46 4 33 14 21 A: input (unsorted) B: output (sorted) C: temporary template <typename T> void MergeSort(T *B, T *A, int n) { if (n==1) { B[0] = A[0]; } else { T* C = new T[n]; cilk_spawn MergeSort(C, A, n/2); MergeSort(C+n/2, A+n/2, n-n/2); cilk_sync; Merge(B, C, C+n/2, n/2, n-n/2); delete[] C; } } merge merge merge 19 3 12 46 33 4 21 14

  26. Work of Merge Sort template <typename T> void MergeSort(T *B, T *A, int n) { if (n==1) { B[0] = A[0]; } else { T* C = new T[n]; cilk_spawn MergeSort(C, A, n/2); MergeSort(C+n/2, A+n/2, n-n/2); cilk_sync; Merge(B, C, C+n/2, n/2, n-n/2); delete[] C; } } CASE 2: nlogba = nlog22 = n f(n) = Θ(nlogbalg0n) 2T1(n/2) + Θ(n) Work:T1(n) = = Θ(n lg n)

  27. Span of Merge Sort template <typename T> void MergeSort(T *B, T *A, int n) { if (n==1) { B[0] = A[0]; } else { T* C = new T[n]; cilk_spawn MergeSort(C, A, n/2); MergeSort(C+n/2, A+n/2, n-n/2); cilk_sync; Merge(B, C, C+n/2, n/2, n-n/2); delete[] C; } } CASE 3: nlogba = nlog21 = 1 f(n) = Θ(n) T∞(n/2) + Θ(n) Span:T∞(n) = = Θ(n)

  28. Parallelism of Merge Sort Work: T1(n) = Θ(n lg n) PUNY! Span: T∞(n) = Θ(n) Parallelism: T1(n) = Θ(lg n) T∞(n) We need to parallelize the merge!

  29. Parallel Merge ma = na/2 ≤ A[ma] ≥ A[ma] Recursive P_Merge Recursive P_Merge Binary Search ≤ A[ma] ≥ A[ma] mb mb-1 Throw away at least na/2 ≥ n/4 0 na A na ≥ nb B 0 nb Key Idea:If the total number of elements to be merged in the two arrays is n = na + nb, the total number of elements in the larger of the two recursive merges is at most (3/4)n .

  30. Parallel Merge template <typename T> void P_Merge(T *C, T *A, T *B, intna, intnb) { if (na < nb) { P_Merge(C, B, A, nb, na); } else if (na==0) { return; } else { intma = na/2; intmb = BinarySearch(A[ma], B, nb); C[ma+mb] = A[ma]; cilk_spawnP_Merge(C, A, B, ma, mb); P_Merge(C+ma+mb+1, A+ma+1, B+mb, na-ma-1, nb-mb); cilk_sync; } } Coarsen base cases for efficiency.

  31. Span of Parallel Merge template <typename T> void P_Merge(T *C, T *A, T *B, int na, int nb) { if (na < nb) { ⋮ int mb = BinarySearch(A[ma], B, nb); C[ma+mb] = A[ma]; cilk_spawn P_Merge(C, A, B, ma, mb); P_Merge(C+ma+mb+1, A+ma+1, B+mb, na-ma-1, nb-mb); cilk_sync; } } CASE 2: nlogba = nlog4/31 = 1 f(n) = Θ(nlogba lg1n) T∞(3n/4) + Θ(lg n) Span:T∞(n) = = Θ(lg2n )

  32. Work of Parallel Merge HAIRY! template <typename T> void P_Merge(T *C, T *A, T *B, int na, int nb) { if (na < nb) { ⋮ int mb = BinarySearch(A[ma], B, nb); C[ma+mb] = A[ma]; cilk_spawn P_Merge(C, A, B, ma, mb); P_Merge(C+ma+mb+1, A+ma+1, B+mb, na-ma-1, nb-mb); cilk_sync; } } T1(αn) + T1((1-α)n) + Θ(lg n), where 1/4 ≤ α≤ 3/4. Work:T1(n) = Claim:T1(n) = Θ(n).

  33. Analysis of Work Recurrence Work: T1(n) = T1(αn) + T1((1-α)n) + Θ(lg n), where 1/4 ≤ α≤ 3/4. Substitution method: Inductive hypothesis is T1(k) ≤ c1k – c2lg k, wherec1,c2 > 0. Prove that the relation holds, and solve for c1 and c2. T1(n) = T1(n) + T1((1–)n) + (lg n) ≤ c1(n) – c2lg(n) + c1(1–)n – c2lg((1–)n) + (lg n)

  34. Analysis of Work Recurrence Work: T1(n) = T1(αn) + T1((1-α)n) + Θ(lg n), where 1/4 ≤ α≤ 3/4. T1(n) = T1(n) + T1((1–)n) + (lg n) ≤ c1(n) – c2lg(n) + c1(1–)n – c2lg((1–)n) + (lg n)

  35. Analysis of Work Recurrence Work: T1(n) = T1(αn) + T1((1-α)n) + Θ(lg n), where 1/4 ≤ α≤ 3/4. T1(n) = T1(n) + T1((1–)n) + Θ(lg n) ≤ c1(n) – c2lg(n) + c1(1–)n – c2lg((1–)n) + Θ(lg n) ≤ c1n – c2lg(n) – c2lg((1–)n) + Θ(lg n) ≤ c1n – c2 ( lg((1–)) + 2 lg n ) + Θ(lg n) ≤ c1n – c2 lg n – (c2(lg n + lg((1–))) – Θ(lg n)) ≤ c1n – c2 lg nby choosing c2 large enough. Choose c1 large enough to handle the base case.

  36. Parallelism of P_Merge Work: T1(n) = Θ(n) Span: T∞(n) = Θ(lg2n) Parallelism: T1(n) = Θ(n/lg2n) T∞(n)

  37. Parallel Merge Sort template <typename T> void P_MergeSort(T *B, T *A, int n) { if (n==1) { B[0] = A[0]; } else { T C[n]; cilk_spawnP_MergeSort(C, A, n/2); P_MergeSort(C+n/2, A+n/2, n-n/2); cilk_sync; P_Merge(B, C, C+n/2, n/2, n-n/2); } } CASE 2: nlogba = nlog22 = n f(n) = Θ(nlogba lg0n) 2T1(n/2) + Θ(n) Work:T1(n) = = Θ(n lg n)

  38. Parallel Merge Sort template <typename T> void P_MergeSort(T *B, T *A, int n) { if (n==1) { B[0] = A[0]; } else { T C[n]; cilk_spawnP_MergeSort(C, A, n/2); P_MergeSort(C+n/2, A+n/2, n-n/2); cilk_sync; P_Merge(B, C, C+n/2, n/2, n-n/2); } } CASE 2: nlogba = nlog21 = 1 f(n) = Θ(nlogba lg2n) T∞(n/2) + Θ(lg2n) Span:T∞(n) = = Θ(lg3n)

  39. Parallelism of P_MergeSort Work: T1(n) = Θ(n lg n) Span: T∞(n) = Θ(lg3n) Parallelism: T1(n) = Θ(n/lg2n) T∞(n)

More Related