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Appendix S2A. cpDNA ML/Par BOO

Govindarajulu et al.— American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 1

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Appendix S2A. cpDNA ML/Par BOO

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  1. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 1 Govindarajulu, Rajanikanth, Colin E. Hughes, Patrick J. Alexander, and C. Donovan Bailey. 2011. The complex evolutionary dynamics of ancient and recent polyploidy in Leucaena (Leguminosae; Mimosoideae). American Journal of Botany 98(12): 2064-2076. Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 100/99 L cuspidata 88-92 L cuspidata 89-92 L esculenta 47-87 100/99 74/< L esculenta 216 L esculenta 48-87-01 99/99 85/98 L matudae 2153 L matudae 49-87 73/79 L pueblana 2089 Appendix S2. Best fitting ML “spene” trees derived for each “spene” tree matrix. Support values represent 100 ML bootstraps and 1000 parsimony jackknife replicates, respectively. A) cpDNA, B) 23L, C) 28, D) A9, E) PA1213, F) A2, G) A4A5, and F) nrDNA ITS. 87/88 L pueblana 2140 </< L pueblana 125-92 58/< 77/59 cpDNA L involucrata 146-91 cpDNA L involucrata 87-92 65/< </< cpDNA L pallida 79-92 </< 98/90 cpDNA L pallida 122-92 100/100 cpDNA L pallida 78-92 L retusa 23-86-06 100/99 58/< L retusa 23-09-02 L retusa 23-86 100/99 100/99 L greggii 20-86-02 100/100 L greggii 82-87 100/100 100/85 L greggii 19-86-10 L greggii 21-86-07 cpDNA L diversifolia 81-92 99/71 Appendix S2A. cpDNA ML/Par BOO cpDNA L diversifolia 82-92 </< cpDNA L leucocephala glabrata 136-92 65/< cpDNA L diversifolia 1666 cpDNA L diversifolia 126-92 </< L pulverulenta 83-87-02 </< </< cpDNA L leucocephala glabrata 94-92 </< cpDNA L leucocephala leucocephala 103-94-04 </< </< cpDNA L leucocephala leucocephala 147-92 </< </< L pulverulenta 84-87 </< cpDNA L leucocephala ixtahuacana 24-91 </< cpDNA L leucocephala leucocephala 133-92 L pulverulenta 1866 </< L pulverulenta 1611 </< cpDNA L leucocephala glabrata 93-92 </< cpDNA L diversifolia 83-92 </< L pulverulenta 1593 </< cpDNA L leucocephala glabrata 84-92 60/51 cpDNA L leucocephala leucocephala 80-92 L trichandra 140-92 98/97 L trichandra 54-88 </< L trichandra 137-92 50/< L trichandra 53-88 </< L trichandra 128-92 </< cpDNA L confertiflora confertiflora 127-92 </< L trichandra 2121 </< cpDNA L confertiflora adenotheloidea 1730 62/< cpDNA L Hybrid 1800 79/59 100/100 cpDNA L Hybrid 1801 83/< L shannonii 1-91 99/78 L shannonii 135-92 92/95 L shannonii 141-92 L shannonii 53-87 100/100 L lempirana 5-91 L lempirana 6-91-03 54/< </< L multicapitula 81-87 98/76 L multicapitula 86-87 </< L salvadorensis 34-88 100/84 82/85 L salvadorensis 17-86 </< L salvadorensis 7-91 100/97 L magnifica 19-84 L magnifica 58-88-09 L lanceolata lanceolata 134-92 74/87 L lanceolata lanceolata 43-85 </< 74/65 L lanceolata lanceolata 913 63/< 73/< L lanceolata sousae 50-87 L lanceolata sousae 51-87 </< 100/97 L collinsii collinsii 51-88 64/< L collinsii collinsii 52-88 L collinsii zacapana 18-84 99/90 99/93 L collinsii zacapana 56-88 </< L collinsii zacapana 57-88-08 100/100 L trichodes 2-86-07 L trichodes 61-88 </< L macrophylla macrophylla 55-88 100/98 79/82 L macrophylla istmensis 47-85 56/< L macrophylla macrophylla 2076 72/58 L lanceolata lanceolata 46-85 77/94 L lanceolata lanceolata 44-85 L lanceolata lanceolata 90-92

  2. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 2 Appendix S2B. 23L ML/Par BOO Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 L cuspidata 89-92 96/76 L cuspidata 88-92 </< 87/80 23L L con aden 1730 2 z 1731 7 z 2063 2D </< 23L L confertiflora adenotheloidea 1731 6 23L L confertiflora adenotheloidea 1800 5C 73/< </< 23L L confertiflora adenotheloidea 1801 6D 23L L confertiflora adenotheloidea 1801 6B L esculenta 47-87 100/100 75/55 L esculenta 216 L esculenta 48-87-01 100/98 85/76 L matudae 2153 L matudae 49-87 71/69 L pueblana 125-92 86/81 </< L pueblana 2089 63/< L pueblana 2140 23L L pallida 122-92 3 7 98/93 23L L pallida 79-92 6 95/87 100/87 23L L pallida 78-92 02 </< 23L L pallida 78-92 03 L retusa 23-86-06 100/100 55/< L retusa 23-09-02 100/73 100/100 L retusa 23-86 100/93 L greggii 19-86-10 100/100 L greggii 21-86-07 100/99 L greggii 20-86-02 L greggii 82-87 100/90 23L L diversifolia 82-92 05 100/95 79/61 23L L diversifolia 83-92 5 7 23L L diversifolia 921 5 L pulverulenta 84-87 100/81 </< L pulverulenta 83-87-02 </< 23L L leucocephala glabrata 136-92 8 73/62 66/< 23L L leuco gla 136-92 1 4 7 9 z 84-92 1 z Lxmix 2054 15b 100/97 23L L leucocephala glabrata 84-92 7 51/< L pulverulenta 1593 L pulverulenta 1611 </< 23L L leucocephala glabrata 93-92 2 23L L leucocephala leucocephala 133 92 11b </< </< </< 23L L leucocephala glabrata 94-92 3 4 23L L leucocephala ixtahuacana 117-92 1 7 </< 23L L leucocephala leucocephala 80-92 6 </< </< 23L L leucocephala ixtahuacana 24-91 1 </< L pulverulenta 1866 23L L leucocephala glabrata 93-92 1 4 /60 23L L leucocephala glabrata 93-92 3 </< </< 23L L leucocephala glabrata 94-92 01 </< </< 23L L leucocephala leucocephala 147-92 6 23L L leucocephala leucocephala 80-92 9 L trichandra 2121 89/70 23L L involucrata 146-91 6 8 98/89 L trichandra 128-92 </< L trichandra 137-92 L trichandra 53-88 </60 </< 23L L diversifolia 82-92 01 99/86 23L L diversifolia 921 2 91/91 23L L pallida 78-92 01 67/60 23L L pallida 79-92 10 </< 23L L pallida 79-92 4 z Hybrid 1625 3D 86/64 91/89 23L L confertiflora adenotheloidea 1800 5B </< 23L L involucrata 146-91 2 7 </< 23L L pallida 122-92 01 </< 23L L pallida 122-92 02 L trichandra 140-92 82/79 L trichandra 54-88 23L L diversifolia 81-92 2 76/65 59/< 23L L diversifolia 81-92 4b 9 </< 23L L diversifolia 83-92 12 </< 23L L diversifolia 921 1 </< 23L L diversifolia 921 4 </< 23L L diversifolia 82-92 02 </< </< 23L L diversifolia 82-92 3 4 23L L confertiflora adenotheloidea 1800 5D 97/86 23L L confertiflora adenotheloidea 1801 6C </< 100/93 23L L confertiflora adenotheloidea 2063 2b 55/< 23L L confertiflora confertiflora 127-92 1 69/< 23L L confertiflora confertiflora 127-92 3 4 5 </< 23L L confertiflora adenotheloidea 2063 2a </< 23L L confertiflora adenotheloidea 1801 6A </< 23L L confertiflora confertiflora 1152 2 54/< 23L L confertiflora confertiflora 1152 3 </< 23L L confertiflora adenotheloidea 1730 3 63/65 23L L confertiflora adenotheloidea 1730 1 4 5 L shannonii 141-92 98/92 L shannonii 53-87 100/99 L shannonii 1-91 78/75 L shannonii 135-92 L lempirana 5-91 100/100 L lempirana 6-91-03 </< L multicapitula 81-87 70/< 95/72 L multicapitula 86-87 </< L salvadorensis 34-88 99/98 L salvadorensis 17-86 89/70 L salvadorensis 7-91 L lanceolata lanceolata 134-92 </< 99/97 L lanceolata lanceolata 43-85 99/< L lanceolata lanceolata 913 73/< L lanceolata sousae 51-87 72/< L lanceolata sousae 50-87 90/62 23L L leucocephala glabrata 84-92 6 68/< 23L L leucocephala ixtahuacana 24-91 5 62/< </< 23L L leucocephala ixtahuacana 117-92 05 </< 23L L leucocephala ixtahuacana 24-91 4 L magnifica 19-84 95/97 L magnifica 58-88-09 L collinsii collinsii 51-88 100/100 L collinsii collinsii 52-88 </< 75/< L collinsii zacapana 18-84 100/100 L collinsii zacapana 56-88 100/90 L collinsii zacapana 57-88-08 </< L trichodes 2-86-07 100/100 L trichodes 61-88 L lanceolata lanceolata 46-85 56/< 86/70 L lanceolata lanceolata 44-85 97/77 L lanceolata lanceolata 90-92 58/< L macrophylla macrophylla 55-88 96/91 L macrophylla istmensis 47-85 83/80 L macrophylla macrophylla 2076 </< 23L L leucocephala leucocephala 80-92 13 2 85/< 23L L leuco gla 93-92 5 z Hybrid 1317 2D </< 23L L leucocephala leucocephala 80-92 4 </< 23L L leucocephala glabrata 94-92 05 </< 23L L leucocephala leucocephala 147-92 01 </< 23L L leucocephala glabrata 94-92 02 </< 23L L leucocephala leucocephala 147-92 04

  3. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 3 Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 28 L leucocephala glabrata 86-92 1 91/63 L trichandra 140-92 L trichandra 54-88 </< 56/< 28 L pallida 79-92 10 L trichandra 137-92 L trichandra 128-92 </< </< Appendix S2C. 28 ML/Par BOO 96/< 28 L pallida 122-92 5 </< </< 28 L pallida 2196 </< </< 28 L involucrata 87-92 10 L trichandra 2121 28 L confertiflora confertiflora 2051 6 1 </< L trichandra 53-88 </< 74/60 28 L pallida 2212 7 59/< 97/77 28 L pallida 78-92 4 28 L pallida 78-92 8 74/70 L shannonii 1-91 89/79 L shannonii 135-92 95/85 L shannonii 141-92 L shannonii 53-87 72/< L lempirana 5-91 </< L lempirana 6-91-03 L multicapitula 81-87 58/< </< L multicapitula 86-87 </< 97/90 L salvadorensis 34-88 84/65 L salvadorensis 17-86 L salvadorensis 7-91 99/97 L magnifica 19-84 L magnifica 58-88-09 100/99 L collinsii collinsii 51-88 </< </< 64/< L collinsii collinsii 52-88 100/100 L collinsii zacapana 18-84 96/93 L collinsii zacapana 56-88 </< L collinsii zacapana 57-88-08 99/74 L trichodes 2-86-07 L trichodes 61-88 52/< 97/98 L macrophylla macrophylla 55-88 86/82 L macrophylla istmensis 47-85 </< 76/61 L macrophylla macrophylla 2076 100/99 L lanceolata lanceolata 46-85 99/92 L lanceolata lanceolata 44-85 L lanceolata lanceolata 90-92 L lanceolata lanceolata 134-92 61/< 28 L leucocephala glabrata 84-92 </< 59/< 28 L leucocephala ixtahuacana 117-92 </< 100/< 28 L leucocephala ixtahuacana 24-91 </< </< 28 L leucocephala glabrata 86-92 6 28 L leucocephala leucocephala 133-92 L lanceolata lanceolata 43-85 </< 28 L leucocephala glabrata 136-92 8 </< 28 L leucocephala glabrata 136-92 9 </< 28 L leucocephala glabrata 136-92 6 L lanceolata sousae 51-87 </< </< </< 28 L leucocephala glabrata 136-92 2 </< 28 L leucocephala glabrata 136-92 3 7 </< L lanceolata sousae 50-87 </< 28 L leucocephala glabrata 93-92 1 55/< 28 L leucocephala glabrata 94-92 1 </< 28 L leucocephala glabrata 94-92 6 51/55 L lanceolata lanceolata 913 88/< 28 L leucocephala glabrata 94-92 3 8 28 L leucocephala glabrata 94-92 4 L retusa 23-86-06 100/100 </< L retusa 23-09-02 100/100 L retusa 23-86 100/95 L greggii 19-86-10 100/100 L greggii 21-86-07 99/99 L greggii 20-86-02 L greggii 82-87 96/78 28 L leucocephala leucocephala 80-92 </< 92/71 L pulverulenta 83-87-02 89/88 L pulverulenta 84-87 L pulverulenta 1593 </59 96/78 </< L pulverulenta 1611 L pulverulenta 1866 28 L diversifolia 921 100/93 28 L diversifolia 45-87 </< 28 L leucocephala glabrata 86-92 5 </< 28 L diversifolia 2181 2 66/60 28 L diversifolia 31-89 3 7 12 </< 28 L diversifolia 81-92 </< 28 L diversifolia 2181 1 5 8 a </< 28 L diversifolia 2181 4 </< 28 L diversifolia 31-89 6 </< 51/< 28 L diversifolia 2176 1 2 3 4 </< 28 L diversifolia 31-89 1 </< 28 L diversifolia 2181 11 </< </< 28 L diversifolia 2176 8 28 L diversifolia 31-89 11 L cuspidata 88-92 100/72 L cuspidata 89-92 </< 28 L confertiflora confertiflora 2051 8 </< 28 L confertiflora adenotheloidea 2063 7 </< 28 L confertiflora adenotheloidea 2063 9 </< 28 L confertiflora confertiflora 2051 1 4 </< 28 L confertiflora adenotheloidea 2063 4 </< 28 L confertiflora adenotheloidea 2063 10 </< 28 L confertiflora confertiflora 2051 2 </< 51/</< 28 L confertiflora adenotheloidea 1730 5 51/< </< 28 L confertiflora adenotheloidea 1730 8 28 L confertiflora adenotheloidea 1730 2 52/< </< 28 L confertiflora adenotheloidea 1730 1 28 L confertiflora confertiflora 127-92 1 4 L esculenta 47-87 99/93 66/55 L esculenta 216 L esculenta 48-87-01 82/76 L matudae 2153 </< L matudae 49-87 99/91 28 L pallida 2165 6 64/51 28 L pallida 2165 11 </< 28 L pallida 2165 10 </< 28 L pallida 2165 1 3 </< 72/< 80/56 28 L pallida 122-92 4 28 L pallida 79-92 8 84/84 28 L pallida 78-92 2 5 L pueblana 2140 L pueblana 2089 83/80 85/82 28 L involucrata 146-91 3 </< 28 L involucrata 146-91 8 </< 63/< 28 L involucrata 1523 1 2 9 28 L involucrata 146 91 1 </< 28 L involucrata 87-92 1 8 73/< </< 28 L involucrata 87-92 7 50/< </< 28 L involucrata 1523 4 28 L involucrata 87-92 4 28 L pallida 79-92 1 5 </< 28 L pallida 78-92 1 </< 28 L pallida 122-92 7 </< 28 L pallida 2212 3 4 5 </< 28 L pallida 122-92 6 </< 28 L pallida 122-92 1 </< </< 28 L pallida 2212 6 L pueblana 125-92

  4. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 4 Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 L cuspidata 89-92 100/91 L cuspidata 88-92 100/< 96/78 A9 L confertiflora adenotheloidea 2063 </< A9 L confertiflora confertiflora 2051 71< Appendix S2D. A9 ML/Par BOO A9 L confertiflora adenotheloidea 1730 18 19 A9 L confertiflora adenotheloidea 1730 21 99/95 L trichandra 140-92 97/86 L trichandra 54-88 98/90 A9 L leucocephala ixtahuacana 24-91 2 100/95 A9 L leucocephala ixtahuacana 24-91 3 4 </< L trichandra 137-92 75/76 L trichandra 53-88 65/< A9 L pallida 79-92 8 13 </< L trichandra 128-92 L trichandra 2121 100/99 84/70 L shannonii 1-91 100/99 L shannonii 135-92 97/91 L shannonii 141-92 L shannonii 53-87 100/93 100/100 L lempirana 5-91 65/< L lempirana 6-91-03 64/< L multicapitula 81-87 98/84 L multicapitula 86-87 </< 100/95 L salvadorensis 34-88 89/66 L salvadorensis 17-86 </< L salvadorensis 7-91 L lanceolata lanceolata 134-92 100/99 L lanceolata lanceolata 43-85 99/94 74/< L lanceolata lanceolata 913 69/60 L lanceolata sousae 50-87 52/< L lanceolata sousae 51-87 100/94 L magnifica 19-84 L magnifica 58-88-09 100/100 L collinsii collinsii 51-88 </< 62/< L collinsii collinsii 52-88 100/100 L collinsii zacapana 18-84 98/90 L collinsii zacapana 56-88 </< </< L collinsii zacapana 57-88-08 100/99 L trichodes 2-86-07 L trichodes 61-88 60/< 100/100 L lanceolata lanceolata 46-85 98/93 L lanceolata lanceolata 44-85 76/63 L lanceolata lanceolata 90-92 100/97 L macrophylla macrophylla 55-88 86/82 L macrophylla istmensis 47-85 L macrophylla macrophylla 2076 100/99 L esculenta 47-87 76/50 L esculenta 216 L esculenta 48-87-01 100/99 92/90 L matudae 2153 100/99 L matudae 49-87 99/61 A9 L pallida 78-92 12D 77/89 A9 L pallida 79-92 11 </< L pueblana 125-92 100/99 L pueblana 2140 91/< L pueblana 2089 66/62 A9 L pallida 122-92 11A 98/98 A9 L involucrata 146-91 A9 L involucrata 87-92 </< 100/100 L retusa 23-86-06 55/< L retusa 23-09-02 100/100 L retusa 23-86 100/93 L greggii 19-86-10 100/100 L greggii 21-86-07 99/99 L greggii 20-86-02 L greggii 82-87 62/54 A9 L leucocephala glabrata 93-92 01 L pulverulenta 1866 100/99 100/99 L pulverulenta 1593 A9 L leucocephala glabrata 93-92 15C </< </< A9 L leucocephala leucocephala 133-92 6 </< A9 L leucocephala leucocephala 133-92 2 </< A9 L leucocephala leucocephala 133-92 3 </< </< </< A9 L leucocephala glabrata 91-92 A9 L leucocephala leucocephala 133-92 5 7 L pulverulenta 1611 A9 L leucocephala leucocephala 147-92 1 </< </< 57/< A9 L leucocephala ixtahuacana 24-91 7 100/99 100/< A9 L leucocephala leucocephala 147-92 2 A9 L diversifolia 81-92 1 </< 96/< A9 L diversifolia 82-92 05 11 </< A9 L diversifolia 82-92 3 8 A9 L leucocephala leucocephala 147-92 3 5 </< A9 L diversifolia 81-92 2 </< 53/< A9 L leucocephala ixtahuacana 24-91 5 A9 L leucocephala leucocephala 147-92 4 59/65 L pulverulenta 83-87-02 L pulverulenta 84-87 100/95 A9 L leucocephala ixtahuacana 117-92 16A 57/< </< A9 L leucocephala glabrata 94-92 13 100/95 61/< A9 L leucocephala leucocephala 133-92 06 A9 L leucocephala glabrata 94-92 23 </< A9 L leucocephala glabrata 94-92 14 </< 66/62 A9 L leucocephala glabrata 94-92 15 A9 L leucocephala glabrata 94-92 17 A9 L leucocephala glabrata 93-92 3 </< A9 L diversifolia 46-87 2 99/65 A9 L diversifolia 46-87 5 </< A9 L diversifolia 46-87 3 </< A9 L diversifolia 83-92 2 3 </< </< A9 L leucocephala glabrata 93-92 5 </< A9 L diversifolia 46-87 4 </< A9 L leucocephala glabrata 93-92 2 </< A9 L diversifolia 83-92 1 </< A9 L leucocephala glabrata 93-92 4 A9 L diversifolia 81-92 3 </< </< A9 L diversifolia 81-92 4 A9 L diversifolia 81-92 5

  5. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 5 Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 Appendix S2E. PA1213 ML/Par BOO 50/< L cuspidata 88-92 L cuspidata 89-92 91/65 </< PA1213 L confertiflora adenotheloidea 1152 2 PA1213 L confertiflora confertiflora 127-92 4 </< PA1213 L confertiflora adenotheloidea 2063 7 </< PA1213 L confertiflora adenotheloidea 1731 1 </< </< PA1213 L confertiflora confertiflora 127-92 2 </< PA1213 L confertiflora adenotheloidea 1152 3 </< 50/< PA1213 L confertiflora adenotheloidea 2063 4 </< PA1213 L confertiflora adenotheloidea 1152 4 </< PA1213 L confertiflora confertiflora 127-92 3 </< PA1213 L confertiflora adenotheloidea 1730 2 PA1213 L confertiflora adenotheloidea 2063 2 100/100 L esculenta 47-87 77/< L esculenta 216 97/64 L esculenta 48-87-01 PA1213 L pallida 79-92 2 80/69 </< L pueblana 125-92 </< L pueblana 2089 </< L pueblana 2140 58/69 </< PA1213 L pallida 122-92 2 </< PA1213 L pallida 78-92 4 </< PA1213 L pallida 79-92 3 </< PA1213 L pallida 79-92 5 </< PA1213 L confertiflora adenotheloidea 1800 3 4 75/< L matudae 2153 L matudae 49-87 100/100 L retusa 23-86-06 53/< L retusa 23-09-02 99/99 L retusa 23-86 99/98 L greggii 20-86-02 100/100 L greggii 82-87 100/94 L greggii 19-86-10 100/96 L greggii 21-86-07 PA1213 L diversifolia 83-92 3 </< PA1213 L leucocephala glabrata 93-92 3 99/99 69/86 PA1213 L leucocephala glabrata 94-92 4 </< PA1213 L leucocephala glabrata 93-92 4 </< PA1213 L leucocephala glabrata 94-92 3 58/61 PA1213 L diversifolia 81-92 2 5 52/< PA1213 L diversifolia 81-92 3 </< PA1213 L diversifolia 81-92 4 PA1213 L diversifolia 82-92 3 </< 99/99 PA1213 L diversifolia 82-92 1 </< PA1213 L diversifolia 83-92 5 </< PA1213 L diversifolia 46-87 2 </< </< L pulverulenta 1866 </< L pulverulenta 1593 </< L pulverulenta 1611 59/< L pulverulenta 84-87 </< PA1213 L leucocephala glabrata 136-92 4 </< PA1213 L leucocephala glabrata 136-92 3 </< PA1213 L leucocephala leucocephala 80-92 3 </< PA1213 L leucocephala 133-92 4 </< PA1213 L leucocephala leucocephala 80-92 4 </< L pulverulenta 83-87-02 PA1213 L leucocephala 133-92 2 61/< PA1213 L confertiflora adenotheloidea 1730 1 PA1213 L pallida 78-92 2 PA1213 L diversifolia 83-92 1 77/73 PA1213 L diversifolia 83-92 2 66/80 L trichandra 140-92 46 L trichandra 54-88 PA1213 L involucrata 141-91 1 </< </< PA1213 L involucrata 141-91 2 PA1213 L involucrata 141-91 5 </< </< 52/55 PA1213 L pallida 78-92 1 57/< PA1213 L pallida 78-92 3 </< PA1213 L pallida 78-92 5 98/97 PA1213 L pallida 122-92 3 63/58 </< </< PA1213 L pallida 122-92 5 69/62 PA1213 L pallida 79-92 1 55/< PA1213 L pallida 122-92 1 PA1213 L pallida 79-92 6 PA1213 L confertiflora adenotheloidea 2063 1 </< PA1213 L diversifolia 81-92 1 </< </< PA1213 L diversifolia 83-92 4 </< PA1213 L diversifolia 46-87 1 </< PA1213 L diversifolia 82-92 5 PA1213 L confertiflora adenotheloidea 1731 2 </< </< PA1213 L confertiflora confertiflora 127-92 1 </< PA1213 L confertiflora adenotheloidea 1731 3 6 </< PA1213 L confertiflora adenotheloidea 1730 3 </< PA1213 L confertiflora adenotheloidea 1152 1 </< PA1213 L confertiflora confertiflora 127-92 5 </< PA1213 L confertiflora adenotheloidea 2063 6 </< PA1213 L confertiflora adenotheloidea 1731 4 </< PA1213 L.conf adeno 1152 7 </< </< L trichandra 137-92 </< L trichandra 53-88 67/< L trichandra 128-92 L trichandra 2121 85/73 L shannonii 1-91 100/99 L shannonii 135-92 100/91 L shannonii 141-92 L shannonii 53-87 100/100 L lempirana 5-91 64/< L lempirana 6-91-03 74/< L multicapitula 81-87 98/74 L multicapitula 86-87 </< 99/93 L salvadorensis 34-88 90/69 L salvadorensis 17-86 L salvadorensis 7-91 </< 100/97 L magnifica 19-84 L magnifica 58-88-09 100/100 L collinsii collinsii 51-88 78/< L collinsii collinsii 52-88 100/100 L collinsii zacapana 18-84 100/95 L collinsii zacapana 56-88 66/< </< L collinsii zacapana 57-88-08 100/100 L trichodes 2-86-07 L trichodes 61-88 55/< 100/97 L lanceolata lanceolata 46-85 99/91 L lanceolata lanceolata 44-85 73/59 </< L lanceolata lanceolata 90-92 99/98 L macrophylla macrophylla 55-88 75/78 L macrophylla istmensis 47-85 L macrophylla macrophylla 2076 L lanceolata lanceolata 134-92 96/85 L lanceolata lanceolata 43-85 72/67 L lanceolata sousae 50-87 91/< L lanceolata sousae 51-87 70/< PA1213 L leucocephala leucocephala 80-92 1 92/75 100/99 PA1213 L leucocephala ixtahuacana 24-91 2 73/< PA1213 L leucocephala ixtahuacana 24-91 1 5 PA1213 L leucocephala glabrata 84-92 3 </< 50/< L lanceolata lanceolata 913 PA1213 L leucocephala glabrata 94-92 1 </< </< PA1213 L leucocephala 136-92 2 PA1213 L leucocephala leucocephala 80-92 2 61/61 </< PA1213 L leucocephala glabrata 136-92 1 PA1213 L leucocephala glabrata 93-92 6 </< </< PA1213 L leucocephala glabrata 84-92 4 </< PA1213 L leucocephala glabrata 93-92 2 </< PA1213 L leucocephala glabrata 93-92 7 PA1213 L leucocephala leucocephala 133-92 1 3 5

  6. Govindarajulu et al.—American Journal of Botany 98(12): 2064-2076. 2011. – Data Supplement S2 –page 6 Desmanthus fruticosus 109-92 Schleinitzia novoguineensis 57-84 91/79 L cuspidata 88-92 L cuspidata 89-92 52/< A2 L confertiflora confertiflora 127-92 4 </< A2 L confertiflora confertiflora 127-92 5 87/75 Appendix S2F. A2 ML/Par BOO </< A2 L confertifora confertiflora 1730 3 A2 L confertifora confertiflora 1730 8 A2 L pallida 79-92 3 99/79 A2 L pallida 78-92 1 </< A2 L pallida 79-92 8 A2 L pallida 122-92 1 </< 85/66 L matudae 2153 </< L matudae 49-87 </< L pueblana 2140 67/51 </< L pueblana 125-92 </< L pueblana 2089 A2 L pallida 79-92 6 </< </< L esculenta 216 </< L esculenta 48-87-01 </< A2 L pallida 79-92 5 </< 100/< </< A2 L pallida 78-92 6 L esculenta 47-87 L retusa 23-86-06 100/99 </< L retusa 23-09-02 100/99 L retusa 23-86 99/93 L greggii 19-86-10 100/100 L greggii 21-86-07 100/98 L greggii 20-86-02 L greggii 82-87 99/88 A2 L diversifolia 82-92 </< 94/87 L pulverulenta 83-87-02 </< L pulverulenta 84-87 L pulverulenta 1593 100/< </< 98/90 L pulverulenta 1611 L pulverulenta 1866 </< A2 L diversifolia 81-92 A2 L diversifolia 83-92 </< 73/59 A2 L leucocephala glabrata 94-92 2 6 </< A2 L leucocephala leucocephala 133-92 3 </< A2 L leucocephala ixtahuacana 24-91 1 </< A2 L leucocephala ixtahuacana 117-92 2 6 </< A2 L leucocephala glabrata 84-92 4 </< A2 L leucocephala leucocephala 93-92 5 </< </< A2 L leucocephala ixtahuacana 24-91 3 A2 L leucocephala ixtahuacana 24-91 6 79/65 L trichandra 140-92 L trichandra 54-88 52/< L trichandra 2121 94/54 50/< A2 L confertiflora confertiflora 127-92 1 3 7 50/< A2 L confertiflora adenotheloidea 2063 51/< L trichandra 128-92 32/< L trichandra 53-88 51/< A2 L confertifora confertiflora 1730 1 7 A2 L confertifora confertiflora 1730 4 </< 53/< A2 L involucrata 146-91 47/< A2 L pallida 78-92 5 54/< L trichandra 137-92 98/72 </< A2 L pallida 122-92 5 </< A2 L involucrata 87-92 </< A2 L pallida 78-92 2 A2 L pallida 79-92 1 77/76 L shannonii 1-91 100/99 L shannonii 135-92 95/93 L shannonii 141-92 L shannonii 53-87 100/100 L lempirana 5-91 L lempirana 6-91-03 60/< 68/< L multicapitula 81-87 100/87 L multicapitula 86-87 </< L salvadorensis 34-88 99/95 86/67 L salvadorensis 17-86 L salvadorensis 7-91 </< 100/98 L magnifica 19-84 L magnifica 58-88-09 100/99 L collinsii collinsii 51-88 67/< L collinsii collinsii 52-88 L collinsii zacapana 18-84 100/100 98/95 L collinsii zacapana 56-88 75/< 54/< L collinsii zacapana 57-88-08 99/97 L trichodes 2-86-07 L trichodes 61-88 69/< 99/93 L macrophylla macrophylla 55-88 73/73 L macrophylla istmensis 47-85 62/55 </< L macrophylla macrophylla 2076 100/99 L lanceolata lanceolata 46-85 100/93 L lanceolata lanceolata 44-85 L lanceolata lanceolata 90-92 L lanceolata lanceolata 134-92 96/86 L lanceolata lanceolata 43-85 A2 L leucocephala galbrata 136-92 96/84 A2 L leucocephala leucocephala 80-92 8 </< A2 L leucocephala glabrata 94-92 3 51/< </< </< A2 L leucocephala glabrata 84-92 3 A2 L leucocephala glabrata 84-92 5 </< </< A2 L leucocephala glabrata 84-92 1 </< A2 L leucocephala leucocephala 80-92 4 </< A2 L leucocephala glabrata 94-92 1 8 </< </< A2 L leucocephala glabrata 84-92 8 A2 L leucocephala leucocephala 80-92 2 7 </< L lanceolata sousae 50-87 L lanceolata sousae 51-87 </< L lanceolata lanceolata 913 18 </< A2 L leucocephala leucocephala 103-94-04 A2 L leucocephala leucocephala 147-92 </< A2 L leucocephala ixtahuacana 24-91 7 </< A2 L leucocephala ixtahuacana 24-91 2 </< A2 L leucocephala leucocephala 133-92 1 </< 74/< A2 L leucocephala glabrata 93-92 1 6 A2 L leucocephala ixtahuacana 117-92 1

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