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Workflow as the Methodology of Science

Workflow as the Methodology of Science. Ian Foster Computation Institute Argonne National Lab & University of Chicago. Science as Workflow. Executed. Executing. Query. Executable. Not yet executable. What I Did. What I Am Doing. Edit. …. What I Want to Do.

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Workflow as the Methodology of Science

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  1. Workflow as the Methodology of Science Ian Foster Computation Institute Argonne National Lab & University of Chicago

  2. Science as Workflow Executed Executing Query Executable Not yet executable What I Did What I Am Doing Edit … What I Want to Do Execution environment Schedule

  3. Example: Biology Public PUMA Knowledge Base Information about proteins analyzed against ~2 million gene sequences Back OfficeAnalysis on Grid Millions of BLAST, BLOCKS, etc., onOSG and TeraGrid Natalia Maltsev et al.,http://compbio.mcs.anl.gov/puma2

  4. Genome Analysis & Database Update (GADU) on OSG April 24, 2006 3,000 jobs GADU

  5. Data Service @ uchicago.edu Example:Cancer Bioinformatics Grid <BPEL Workflow Doc> <Workflow Inputs> link BPEL Engine Analytic service @ duke.edu link link <Workflow Results> link Analytic service @ osu.edu caBiG: https://cabig.nci.nih.gov/; BPEL work: Ravi Madduri et al.

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