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Enzymes In Depth. With pH!. pH. Enzymes. Globular proteins Built from amino acids that have acidic and basic characteristics Amino acids have both a carboxylic acid (COOH) and amine (NH3) groups. Enzymes. R-COOH C-COO -1 + H+1 R-NH3 +1 R-NH2 + H+1 Ionic bonds
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Enzymes In Depth With pH!
Enzymes • Globular proteins • Built from amino acids that have acidic and basic characteristics • Amino acids have both a carboxylic acid (COOH) and amine (NH3) groups
Enzymes • R-COOH C-COO -1 + H+1 • R-NH3 +1 R-NH2 + H+1 • Ionic bonds • Increase solution pH can shift equilibrium
Active sites have R groups • R groups help substrates attach to active site • Only works if the arrangement of R groups interact properly
+/- • H = Hydrogen bonding • R = Van der Waals bonding
At optimal pH • Enzyme attaches to substrate with 2 ionic bonds • Groups allow for ionic bonding (caused by a transfer of H ion from COOH in the side chain of one amino acid to a NH2 group
Acidic pH • Nothing will bother the NH3 + but the COO will want a H ion • pH (acid = more H ions; basic = more OH ions) • No ionic bond can form
Basic pH • COO- will not be affected • But NH3+ will lose a H • No ionic bond will form