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Lecture 13 : Mechanoreception. 10/14/09. Science / Nature papers. Broadly important phenomena Short format (4 pgs) Very dense Multipanel figures Long figure legends Equivalent to several “regular” papers Clear writing. Questions. What are the mechanoreceptive molecules?
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Lecture 13 : Mechanoreception 10/14/09
Science / Nature papers • Broadly important phenomena • Short format (4 pgs) • Very dense • Multipanel figures • Long figure legends • Equivalent to several “regular” papers • Clear writing
Questions • What are the mechanoreceptive molecules? How do you know if you found the right molecule? • Are the molecules common through all organisms? • How is the signal transduced?
How do you prove a protein’s function? • Find a mutant or mutate gene - knock out • Knock gene in to rescue mutant • Show similarity to known sequences in other organisms (homologous) • Label and express - see if gene is turned on in right cells
In situ expression of nompC in sensory organs macrochaete microchaete Proboscus bristles Chordotonal organs of halteres Walker et al fig 7
Halteres also beat and are used as gyroscopes during flight Chordotonal organs are used to sense beating and provide feedback during flying
Skin connected to cytoskeleton by receptor Ion channel Tubulins MEC - mechanosensory proteins identified from mutants
Trp-4 = CeNOMPC • How is it working in the worm? • What are the function of the cells where it is present?
Li et al 2006 • Trp-4 mutants move differently • Bend more • Bend more frequently • Putting trp-4 back in returns to wild type • Rescue
TRP-4 expressed in the dopamine neurons Dopamine neurons Interneurons Wormbase
Expression of TRP4 in dopamine neurons CEP neuron Supp Fig S1a,c
Expression of TRP4 in DVA and DVC Supp Fig 1b
Crystal structure Structure is made of barrel from 11 beta sheets and one alpha helix going up center S65 - Y66 - G67 react to form a chromophore which fluoresces
GFP naturally fluoresces Absorbs light at UV or blue wavelengths Emits light in green
GFP can be used to monitor when and where a gene is expressed
G-CaMP Ca+2 M13 M13 chain of myosin light chain kinase CaM - Ca+2 binding protein cpEGFP
GCaMP [Ca+2] dependent fluorescence Inc in Ca+2 100 M Ca+2 Nakai et al 2001
Express GCaMP in DVA cell Tie down end of worm
Are you convinced? • Does trp-4 transduce bending motion? • Is this the whole story? • What other experiments could they do?