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Building Cyber-Infrastructure and Supporting eScience

Building Cyber-Infrastructure and Supporting eScience. Satoshi Sekiguchi Director, Grid Technology Research Center, AIST, JAPAN s.sekiguchi@aist.go.jp. High speed network (over 1G – 10G). Grid enabled Business. Grid enabled Engineering. Medical Informatics. eBiz, service. Nano-tech

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Building Cyber-Infrastructure and Supporting eScience

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  1. Building Cyber-Infrastructure and Supporting eScience Satoshi Sekiguchi Director, Grid Technology Research Center, AIST, JAPAN s.sekiguchi@aist.go.jp

  2. High speed network (over 1G – 10G) Grid enabled Business Grid enabled Engineering Medical Informatics eBiz, service Nano-tech Informatics Bio-Informatics Solution Utility Chem Infoma HPC Webservice Community ＪＳＴ Portal/ASP Personal Wether service ＪＳＴ Access Grid Grid Technology Science and Engineering platform Upper Middle Community Infra ＩＰＡ Operation/Human resoure Peta Scale Grid Ubiquitous Grid Database/Expression ITBL/SuperSINET SETI/United Device Lower MIddle sensor Mega Computing 1PFLOPS PC x 100M SC x 10000 Distributed Storage 10PB GPS Earth Q Wireless network Tremendous Sensor Huge datastream P2P grid METI program Mobile Cam Server tech Blood pressure Security IPv6 FTTH/xDSL/Wireless AP/100M-

  3. GRID: Concept and Reality • Key Concept: • Resource Virtualization • Computers, storage, sensors, networks, softwares, people/organization … • WWW – Whenever, Wherever, Whoever • Transparency – Ubiquitous (?) • Similarity – Electric Power Service • Plug-in at consumer • Public utilities – social infrastructure • 99.9....9% availability, reliability, security • 安定・安心・安全

  4. Detector forLHCb experiment Detector for ALICE experiment VLBI: Kashima 34m telescope GRID: Consumers scenario (sensors) • To provide infrastructure and facilities needed for next major stages of collaborative research in: • genomics and bioscience • particle physics • astronomy • climatology • engineering design • social sciences • Medical Engineering Bio Grid JVO

  5. Correspondences between agencies (US-JP) US JPN NEDO Council S&T Coordination Office IPA AIST METI Env.,nanotech, Bio, Life, etc GTRC Commerce, Industry, Energy Sekiguchi DOC TACC RICS DOE MEXT JAERI JST JAMSTEC ES ctr NSF JSSP RIKEN Sci, Tech,& Edu (sports, culture) Univ Matsuoka U.Tokyo SOUM Titech E-Science & Computation Science NII IMS CRL

  6. AIST Grid Projects (Underway)

  7. Other Grid related Projects (Underway)

  8. National Research Grid Initiative (NAREGI) • A new R&D project funded by MEXT • FY2003-FY2007 • ~2B JPY budget in FY2003 • 1.5B for Grid R&D, 0.5B for Nano-tech apps. • One of Japanese Government’s Grid Computing Projects • Selected National Labs. Universities and Industry are to be involved in the R&D activities

  9. National Research Grid Initiative • To develop a Grid Software System • R&D in Grid Middleware and Upper Layer • prototyping for future Grid Infrastructure in scientific research • To provide a Testbed to prove that the High-end Grid Computing Environment • 100+Tflop/s expected by 2007 • practically utilized in the Nano-science Simulations over the Super SINET. • To Contribute to Standardization Activities, • e.g., GGF • To Participate in International Collaboration • Europe, U.S., Asian Pacific

  10. Participating Organizations • National Institute of Informatics (NII/MEXT) • Site for R&D in Grid Software and Networking • Institute for Molecular Science (IMS/MEXT) • Site for R&D in Computational Nano-sciences and Simulation Software Platform • Universities and National Laboratories(Joint R&D) • AIST, Tokyo Inst. Tech, Osaka-u, Kyushu-u, Kyushu Inst. Tech., etc. • Research Collaboration • ITBL Project, National Supercomputing Centers etc. • Participating Vendors • IT and Chemicals/ Materials

  11. Hokkaido University Inter-university Computer Centers (excl. National Labs) circa 2002 HITACHI SR8000 HP Exemplar V2500 HITACHI MP5800/160 Sun Ultra Enterprise 4000 University of Tsukuba FUJITSU VPP5000 CP-PACS 2048 (SR8000 proto) Kyoto University FUJITSU VPP800 FUJITSU GP7000F model 900 /32 FUJITSU GS8000 Tohoku University NEC SX-4/128H4(Soon SX-7) NEC TX7/AzusA Kyushu University FUJITSU VPP5000/64 HP GS320/32 FUJITSU GP7000F 900/64 University of Tokyo HITACHI SR8000 HITACHI SR8000/MPP Others (in institutes) Tokyo Inst. Technology (Titech) NEC SX-5/16, Origin2K/256 HP GS320/64 Nagoya University Osaka University FUJITSU VPP5000/64 FUJITSU GP7000F model 900/64 FUJITSU GP7000F model 600/12 NEC SX-5/128M8 HP Exemplar V2500/N

  12. Proposed Solutions • Diversity of Resources (松竹梅 “Shou-Chiku-Bai”) • 松(“shou” pine) – ES – like centers 40-100Teraflops x (a few), 100-300 TeraFlops nationwide • 竹(“chiku” bamboo) – Medium-sized machines at SCs, 5-10 TeraFlops x 5, 25-50 TeraFlops aggregate / Center, 250-500 TeraFlops total • 梅(“bai” plumb) – small clusters and PCs spread out throughout campus in a campus Grid x 5k-10k, 50 -100 TeraFlops / Center, 500-1 PetaFlop Nationwide • Division of Labor between “Big” centers like ES and Univ. Centers, Large-medium-small resources • A National Grid Infrastructure to virtualize/federate these Resources ($120 mil approved 2003-2007) ES’s Univ SCs Original slide: courtesy of S.Matsuoka

  13. 高速ネットワーク (over 1G – 10G) Everyday Grid – Tier model 竹 Bamboo 松PINE Larger Jobs 梅 Plum SITE-A SITE-B SITE-C

  14. Center for Grid R&D (Jinbo-cho, Tokyo)

  15. AIST super cluster for e-Science platform • Target performance: 10～20 TFLOPS for Linpack • Challenge for one of the fastest clusters in the world • Development of ‘real-use’ cluster system • Delivered 1Q(’04) • Software • SCore System Software • for Cluster managemnet and communication • Compilers and utilities • C,C++、FORTRAN(77, 90) • MPI、OpenMP • Parallel debugger, Performance monitoring tools • GRID support • Globus, condor, GridRPC, etc Components • Computing nodes (2000～1000 Pus) • Opteron 2GHz • 4GB/proc • Interactive nodes • Network for computation • RDMA support, >3Gbps/link, High bi-section BW • Myrinet… • Network for management and data transfer • Gigabit Ethernet • File system • Disks of each node are used for scratch • Shared file system (NAS …)

  16. Overviews Original slide: courtesy of IBM Japan

  17. Summary • E-Science is a great concept for future our life • Scientists, Education, • School, Home • Commercial scene • Grid meets e-Science needs perfectly • Resource sharing & virtualization • Tele-Science, remote-collaboration • Unfortunately  Japan government tends to have “e-Japan” rather than “e-Science”, sigh • Program like “e-Science” or “Cyber Infra” • Projects launched separately

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