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Creating a Clinical Data Element Dictionary A Proposal

CDISC Board of Directors Meeting 10-11 Dec 2007. Creating a Clinical Data Element Dictionary A Proposal. Preamble. CDISC has made progress on many fronts There is a CDISC “brand” CDISC has worked on strategies/plans over the years Currently a strategy in place

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Creating a Clinical Data Element Dictionary A Proposal

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  1. CDISC Board of Directors Meeting 10-11 Dec 2007 Creating a Clinical Data Element DictionaryA Proposal

  2. Preamble • CDISC has made progress on many fronts • There is a CDISC “brand” • CDISC has worked on strategies/plans over the years • Currently a strategy in place • Operational plans/objectives for 2008 in place • 2008 budget is in place • Fundamentally change some of CDISC’s approach

  3. Preamble • This is a discussion first and foremost about WHAT we will do. • What one thing, if done well and consistently, would have the most impact on your business? • Ken Blanchard, Mission Possible • What is ‘the pearl of great price.’ • If we agree on WHAT, then we can discuss HOW.

  4. Motivation for the WHAT • What standards work is done today – Lilly example • Lilly Data Element Standards • \\Rodan\rodan.grp\GCDS_EB_PUBLIC • 3560 pages in our “Dictionary” • ~25,000 variables • It’s all pdf (yuk !!!!)

  5. Motivation for WHAT • Link to Analysis Dataset Standards • http://corpweb.d51.lilly.com/statmath/CoE/ADS/ADS_std.html • Thousands of pages of documentation in our total ADS specifications • For each study, CROs get hundreds of pages of requirements that describe the data elements that we want, variable names, valid values, formats, etc.

  6. Motivation for WHAT • Dozens of people at Lilly and CROs communicate using these voluminous documents • CROs have dozens of people mapping data to company-specific formats, naming conventions, etc. • The CDISC Business Case largely predicated on eliminating these activities • Reduce mapping data from one form to another to transfer or to integrate it.

  7. Motivation for WHAT • http://www.wikihit.org/wiki/index.php/Main_Page • The Clinical Data Definitions created in WikiHIT are not completely useful for clinical research studies. • caDSR has some useful elements, but is a bit outdated and not entirely functional for what is needed for clinical research studies. • Too complex in all its detail • NCI EVS has some useful elements, but does not have all the information and functionality that is needed by companies involved in clinical research. • Data definitions do not have all information (e.g. valid values)

  8. The Language of Clinical Trials • It is more important to share a common vocabulary than it is to have agreement on common grammatical rules.  Content is more important than structure. • Es ist wichtiger, einen allgemeinen Wortschatz, als zu teilen es Vereinbarung über allgemeine grammatische Richtlinien haben soll. • A common vocabulary more important for sharing than understanding of typical rules of grammar.

  9. CDISC Adoption by Pharma • Make SDTM more useful, implementable • Need more specificity • Need more definitions on variables – data elements • Standard data elements – this is what FDA wants, what pharma wants, what CROs want • FDA under pressure to do something quickly? • CDISC dealing with healthcare, other standards organizations, etc. • Don’t let the perfect hold up the good • Need more focus from CDISC

  10. CDISC Adoption by Pharma • It’s about saving dollars for pharma, CROs and labs by simplifying interchange of data. • It’s about helping companies and FDA integrate data from regulated clinical research studies. • CDISC Business case has little to do with healthcare at this point.

  11. Motivation for WHAT • Summary • There is an enormous unmet need for more content. • The CDISC Business Case is largely dependent on well defined data element standards being broadly available. • Others are playing in this space, but do not meet the needs of pharma clinical research and regulatory submissions. • CDISC Terminology Program has primarily focused on controlled terminology supporting SDTM, but not the data elements themselves.

  12. What Is a Data Element? • All the pieces of information (i.e. metadata) needed to unambiguously describe a concept • English dictionary analogy • Word – desk • Phonetic spelling – dĕsk • Part of speech – noun • Definition – a piece of furniture with a flat top for writing [could also be thought of as the concept] • Source – Latin, discus • etc.

  13. Data Element • A Data Element is a unit of data for which definition, identification, representation, and permissible values are specified by means of a set of attributes; the smallest unit of data. • The purpose of a data element definition is to define a data element with words or phrases that describe, explain, or make definite and clear its meaning.

  14. Data Elements – Vertical v. Horizontal Vertical Data Set Structure • Valid Values for Variable are: • HR, SBP, DBP. • A controlled terminology • For each ‘term’, provide the metadata to describe it: • Definition, units, valid values, etc.

  15. Data Elements – Vertical v. Horizontal Horizontal Data Set Structure Each variable has a name (terminology) and a corresponding set of metadata to describe it (definitions, units, valid values, etc.)

  16. Clinical Data Element for Pharma • Variable name (draft) • Label / concept • Valid values of the variable itself • Data type (num, char, date, …) • Units • Key words (e.g. biomarker, osteoporosis, …) – facilitate searches • Source / reference (as needed) • SDTM data domain • Regulatory requirement • [A team needs to define what are the essential metadata pieces of information that are parsimonious – enough to eliminate ambiguity, but few enough to be useful, consumable, understandable, burdenless.]

  17. Creating a Clinical Data Element Dictionary (CDED) • Task Force Members • Steve Ruberg • Bron Kisler • Scott Getzin • Doug Fridsma • Chris Chute • Sue Dubman • Dave Iberson-Hurst • Cara Willoughby

  18. Proposal – WHAT - Unmet Need • Comprehensive, electronically accessible, organized dictionary of unambiguous data element standards for our industry • One of the most fundamental problems we all face within our own pharma companies, but even more acutely across the pharma industry/enterprise. • Consistent with Strategy Theme #2, #5, #6 • THE place where people go for clinical data element standards. • THE thing for which CDISC is known ?!?!

  19. Alignment and Focus • If additional funding can be secured, standards specific to therapeutic areas will become part of the extended CDASH scope. • CDISC Press Release #33 • 15 May 2007 • KEY QUESTION • Given the importance of this area and the need to move quickly, should we re-prioritize and divert resources (people and $$) to this effort?

  20. Alignment and Focus • FOCUS • Where do we focus? • ISO, AHIC, AHRQ, NLMEc, industry architecture, … • Initial focus on meeting pharma industry needs • If others want to piggyback on that effort, that is fine. • Initial focus on clinical data and clinical trial metadata • Initial focus on raw/observed data • There is a lot of territory to conquer within this focus area. Other opportunities (pre-clinical data elements, derived data elements) can be explored in the future.

  21. Impact on Other CDISC Teams • Clinical Data Element Dictionary (CDED) • Terminology, SDTM, CDASH, LAB and SEND all converge into a common approach focused on the data elements and their exquisite definition • Reduces need to harmonize CDISC models if they all utilize the same data element definitions • Harmonization happens “on the front end” rather than after the fact • The transport standard for carrying standardized content (ODM, HL7, SAS, other???) can be whatever • BRIDG – work continues as is • Tightly coordinate standard data elements with BRIDG efforts

  22. Creating a Clinical Data Element Dictionary (CDED) Content Standards Transport Standards Initial Inputs CDASH SDTM SAS CDED 80% LAB 20% ODM Protocol TB? HL7 CV? Other Existing?

  23. Proposal • HOW - Business model • An open, electronic, peer production environment with appropriate governance • Like MedDRA, but open and free • Like Wikipedia, but more governance • Like LINUX, but more granular and dynamic • CDISC must adopt a more flexible and rapid development process

  24. Clinical Data Element Standards Governance Final Template Review Submission Anyone • Downloadable (define.xml) • Searchable – text, key words • search shows status (submit, review, final)

  25. Governance for the CDED Governing Board 2 Full-Time CDISC Employees Lead 1 Lead 2 Lead 3 ... Lead k Team 1 Team 2 Team 3 Team k Lead 1 Lead 2 Lead 3 Lead k . . . ~ 6-8 SME’s ~ 6-8 SME’s ~ 6-8 SME’s ~ 6-8 SME’s

  26. Proposal • WHO - CDISC • CDISC has the opportunity to assert an even greater leadership role in this arena. • Leverage CDISC’s strengths – Strategy Theme #1 Independence Consensus building Strong pharmaceutical / clinical research expertise Global recognition Place substantial priority and focus on this effort “The pearl of great price”

  27. Proposal • WHEN - ASAP • The time is right to charge ahead aggressively • There is a large, unmet business need • FDA and others are looking for a “content leader” • CDISC has ongoing terminology efforts • Technology is in place (i.e. wikis) • Mindset is in place (i.e. people can work virtually) • Others are advancing on this front and we may be left out

  28. Budget • Transition personnel to this effort • Continue/finalize ongoing CDASH efforts • Redirect some Terminology Team efforts • Need part-time Governance team members • Contracted for ~25% of their time • SMEs for TA or data domains • Leverage CROs, software members of CDISC

  29. Summary • There remains a clear need to have unambiguous clinical data element standards (CDES) • Considerable efforts still spent on exchanging data • Considerable efforts still spent on integrating data • Needed across the drug development industry • Broad set of data domains (safety, efficacy, outcomes, PK, etc.) • Independent of strategies related to messaging or transport technologies • Let’s act decisively and move quickly.

  30. Benefits of Using Documented CDEs • Facilitates common data collection by defining content and scope. • Supports semantic data relationships. • Defines valid values for enumerated data. • Improves understanding of data. • Simplifies and documents data analysis. • Provides historical context for data collections. • Encourages reuse of existing data structures. • Facilitates sharing of data across organizational entities. • Facilitates integration of data across studies.

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