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Biological Acquisition Unit. Team Members : Fred Avery Ny ‘ Jaa Bobo Gene Council Salvatore Giorgi Advisors: Dr. Helferty Dr. Pillapakkam. Outline of Presentation . Mission Overview O bjective Theory Background / Previous R esearch Biological Analysis Success Criteria Design
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Biological Acquisition Unit Team Members: Fred Avery Ny ‘JaaBobo Gene Council Salvatore Giorgi Advisors: Dr. Helferty Dr. Pillapakkam
Outline of Presentation • Mission Overview • Objective • Theory • Background / Previous Research • Biological Analysis • Success Criteria • Design • Constraints • Design Process • System Architecture • Electrical System • Filtration System • Block Diagram • Design Compliance • Management • Team Members • Advisors • Budget Outline
Objective • Measure the earth’s magnetic field as a function of altitude. • Take biological samples in stratosphere and lower mesosphere. • Measure flight dynamics of the rocket.
Theory • An inertial measurement unit (IMU) is an electrical device consisting of accelerometers and gyroscopes that are used to measure the rocket’s flight dynamics (roll, pitch, and yaw). • The magnetometer will measure the strength and direction of the earth’s magnetic field. • The filtration system will collect organic and inorganic material suspended in the atmosphere.
Background • In 2006, the European Science Foundation funded an exploratory workshop on “Microbiological Meteorology” at the French National Agronomic Research Institute (INRA) in Avignon. • Potential roles of micro-organisms • Act as cloud condensation nuclei and to participate in radiative forcing. • Many airborne micro-organisms likely metabolize chemical components of aerosols thereby modifying atmospheric chemistry.
Previous Research • In 2008, a study identified bacterial species Bacillus subtilis, Bacillus endophyticus, and the fungal genus Penicillium. • In 2005, a study showed about 25% of the particles suspended in air in the size range of 0.2 to 50 μm are primary biological aerosol particles.
Biological Analysis • DAPI • DAPI (6-diamidino-2-phenylindole) is a stain used in fluorescence microscopy. DAPI passes through cell membranes therefore it can be used to stain both live and fixed cells. • BRDU • Bromodeoxyuridine (5-bromo-2-deoxyuridine, BrdU) is a synthetic nucleoside that is used for detecting actively dividing cells. • Genetic Sequencing • Determines the number of nucleotides in sample’s DNA: adenine, guanine, cytosine, and thymine • Scanning Electron Microscope • Scans the sample and re-generates image to be analyzed, i.e. structural analysis of microbes
Success Criteria • Acquire Stratospheric specimen • Collect a statistically significant sample to compare to previous studies. • Amount of samples • Type of microbes • IMU (Inertial Measurement Unit) • Accurately and reliably record data such as: • Velocity • Flight Dynamics • Gravitational Force • Magnetometer • Study magnetic field in upper atmosphere. • Compare experimental magnetic field to actual values .
Constraints • The weight of the canister must not be more than 20+0.2lbs. • No power until after takeoff. • The center of gravity should lie within the 1x1x1 inch (x, y, z) envelope of the centriod of the payload canister. • Maximum height is 4.75 inches and maximum diameter is 9.3 inches. • No Lithium rechargeable batteries.
Design Process Schematics, Module Placement on Plate chipKIT Max 32, magnetometer, G Switch, SD card, SD reader, NPT valve, filter canister, filter paper, IMU Prepare Functional Design Confirm System Functionality Data Acquisition Purchase Materials Test Separate Components Compatibility, functionality, defects
System Architecture 2 9 VOLT BATTERIES MAGNETOMETER PIC32 MICROCONTROLLER G- SWITCH IMU Valve for Bio-Filtration System 2 GB SD CARD and READER KEY Power Data
Pic32 ChipKIT Microprocessor Flash Memory: 512K RAM Memory: 128K Operating Voltage: 3.3V Operating Frequency: 80 MHz Typical Operating Current: 90 mA Input Voltage: 7 to 15V Input Voltage (maximum): 20V I/O Pins: 83 Analog Inputs: 16 Analog Input Voltage Range: 0V to 3.3V DC Current Per Pin: +/- 18 mA
Triple Axis Magnetometer HMC584 Power: 2.5 to 3.3 V Field Range: +/- 4 Gauss Current: 0.9 mA Bandwidth: 10 kH Weight: 50 mg
Atomic IMU - 6 Degrees of Freedom Triple-axis accelerometer Sensitivity: 1.5 g, 2 g, 4 g or 6 g Single axis 300°/s gyroscope Voltage: 3.4 to 10 V Current: 24 mA Bandwidth: 150 Hz (Z axis) 350 Hz (X and Y axis)
Filter System • Connects to two ports: Static and Dynamic • Dynamic port draws in samples • Air flow exits through the static port • Contains four filters in series • Filters are decreasing in size from 5 to 0.2 μm • Filter system terminates with NPT connector at each end.
Design Compliance • Predicted final mass is 10+0.2 lbs • IMU, magnetometer, batteries, SD card / reader, and microprocessor weigh less than 2 lbs • Projected filtration system weight is less than 2 lbs • More weight needed • Payload Activation • G-switch • Open circuit until g-switch activation
Team Members Fred Avery (ME) • Filtration System • Center of gravity testing • Mass Flow Rates • Ny ‘JaaBobo (EE) • Hardware • Magnetometer • IMU • Power • Gene Council (EE) • Hardware • Magnetometer • IMU • Chip programming • Salvatore Giorgi (ECE) • Team Leader • Microprocessor • Data Acquisition • Filtration System
Advisors Electrical Dr. John Helferty Department of Electrical and Computer Engineering Mechanical Dr. ShriramPillapakkam Department of Mechanical Engineering Biological Dr. Erik Cordes Department of Biology
Conclusion • Issues • Integrating filtration system with canister • Correctly implementing the SD card with the microprocessor • Concerns • Transporting samples from Virginia to Pennsylvania • Properly sterilizing the filtration system • Shared canister logistics • Future Plans • Order microprocessor, IMU, and magnetometer • Design and build filtration system