1 / 16

Harmonizing Hippocampal Segmentation: Validation and Consensus on AC-PC Axis

This project aims to validate and achieve consensus on the AC-PC (anterior commissure-posterior commissure) axis for harmonizing hippocampal segmentation. Empirical data and expert opinions are utilized in a Delphi method to make informed decisions. The project also evaluates segmentation variability and compares it to pathology. The results will contribute to the development of a standardized protocol for hippocampal segmentation.

monicaross
Download Presentation

Harmonizing Hippocampal Segmentation: Validation and Consensus on AC-PC Axis

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript


  1. VII PMT meeting – Feb 29, 2012 • Agenda: • Axes check • Validation vs Pathology • Paper Publications • Congress presentations & Meetings

  2. Project method • Delphi is required to take all decisions based on experience + evidence • Empirical data on SUs taken on ACPC is fed to Delphi (external & internal landmarks) • Delphi decides on which SUs make up harmo hippo (internal landmarks) • Delphi decides that best segmentation is on hippo axis (10-5-1 in favour-neutral-against) • Empirical evidence collected that total hippo volume on ACPC = hippo axis

  3. 1. Delphi is required to take all decisions based on experience + evidence

  4. 2. Empirical data on SUs taken on ACPC is fed to Delphi (external & internal landmarks) 3. Delphi decides on which SUs make up harmo hippo (internal landmarks)

  5. 2. Empirical data on SUs taken on ACPC is fed to Delphi (external & internal landmarks) 3. Delphi decides on which SUs make up harmo hippo (internal landmarks)

  6. 4. Delphi decides that best segmentation is on hippo axis (10-5-1 in favour-neutral-against) Round 1: Which plane Round 2: Agree on hippo plane Rounds 3 and 4 converged on mean angle between R and L axes Fisher’s Binomial Fisher’s exact DATA SHOWN IN PARIS, JULY 2011 Hippo AC-PC same Disagree same Agree Delphi: www.hippocampal-protocol.net/SOPs/delphipanel.html , access with user: prova , pw: prova

  7. 5. Empirical evidence collected that total hippo volume on ACPC = hippo axis LA*= LA traced only 5 images oriented along ACPC line

  8. 1 tracer VARIABILITY EVALUATION GOLD STANDARD VALIDATION vs PATHOLOGY 5 expert tracers 20 naive tracers Training (tracing 20 hippos on 1.5T ADNI scans with each SU) (SAME on 3T ADNI scans) Local Protocol: Experimental set (1.5T ADNI): 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) Local Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) Delphi panel → harmonized prot Benchmark Harmonized hippos: 1.5T ADNI scans 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) Qualification (20 tracers) Qualification Harmonized Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) Harmonized Protocol: Experimental set (1.5T ADNI): 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) global and local 95% confidence intervals VALIDATION ON 1800 HIPPOCAMPI IN TOTAL Harmonized Protocol: 1.5T ADNI scans 2 sides x 5 Scheltens’s atrophy scores x 3 time points (0-12°month-24°month) x 3 scanners + retracing for timepoint 1 (SAME on 3T ADNI scans) (total for each rater: 240 hippos – including 40 hippos already traced) RM-ANOVA: test of protocol main effect RM-ANOVA: test of main effects side, trace-retrace, atrophy, time, scanner, rater The best 5 naive tracers RM-ANOVA: test of rater and rater by center terms

  9. Pros & Cons Accepting the consensus on hippo axes would: Practical Reduce partial volume effects and facilitate manual tracing (tracers and panelists’ subjective reports) Changing to AC-PC would: Practical Facilitate automatic preprocessing • Methodological • Violate general method of the project (decisional tree) • Interfere with the aim of the project (define gold standard as best possible accuracy) • Disregard and contradict the opinion of 20 international experts of hippocampus • Methodological • Contrast with the orientation on which evidence was gathered • Note that this contrast : • did not constitute a problem for 20 international hippo experts • did not correspond to quantitative evidence showing any impact on the HarmoProt

  10. Validation versus pathology 1 tracer Local Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) WHICH SAMPLE? Qualification on benchmark images (total for each rater: 40 hippos) Harmonized Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) RM-ANOVA: test of protocol main effect

  11. Paper Operationalization Alzheimer’s and Dementia

  12. Papers describing the project Survey of protocols (preliminary phase; published, JAD 2011) Operationalization (preliminary phase; to be completed) Delphi consensus (Brescia Team) Master tracers’ practice and reliability (Brescia Team) Development of certification platform (Duchesne and coll?) Validation data and Protocol definition (Brescia Team) Validation vs pathology (TBD)

  13. 1 tracer VARIABILITY EVALUATION GOLD STANDARD VALIDATION vs PATHOLOGY 5 expert tracers 20 naive tracers Training (tracing 20 hippos on 1.5T ADNI scans with each SU) (SAME on 3T ADNI scans) Local Protocol: Experimental set (1.5T ADNI): 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) Local Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) Delphi panel → harmonized prot Benchmark Harmonized hippos: 1.5T ADNI scans 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) Qualification (20 tracers) Qualification Harmonized Protocol: 1.5T 3D T1-weighted scans from (Bobinski et al., 2000) pathologically verified set (total for rater: 30 hippos) Harmonized Protocol: Experimental set (1.5T ADNI): 2 x each of the 5 Scheltens’s atrophy score x 2 sides (SAME on 3T ADNI scans) (total for each rater: 40 hippos) global and local 95% confidence intervals Harmonized Protocol: 1.5T ADNI scans 2 sides x 5 Scheltens’s atrophy scores x 3 time points (0-12°month-24°month) x 3 scanners + retracing for timepoint 1 (SAME on 3T ADNI scans) (total for each rater: 240 hippos – including 40 hippos already traced) RM-ANOVA: test of protocol main effect RM-ANOVA: test of main effects side, trace-retrace, atrophy, time, scanner, rater The best 5 naive tracers RM-ANOVA: test of rater and rater by center terms

  14. Congress presentations - AAN 2012, New Orleans Oral Presentation S04.003, April 24, Aging and Dementia: Therapeutic Interventions, 1.30 pm M Boccardi, M Bocchetta, L Apostolova, J Barnes, G Bartzokis, G Corbetta, C DeCarli, L DeToledo-Morrell, M Firbank, R Ganzola, L Gerritsen, W Henneman, R Killiany, N Malykhin, P Pasqualetti, J Pruessner, A Redolfi, N Robitaille, H Soininen, D Tolomeo, L Wang, C Watson, H Wolf, S Duchesne, CR Jack, GB Frisoni. Delphi consensus on landmarks for the manual segmentation of the hippocampus on MRI: preliminary results from the EADC-ADNI Harmonized Protocol working group. - AAIC 2012, Vancouver Abstract n. 26291, submitted to AAIC 2012 M Boccardi, M Bocchetta, A Redolfi, P Pasqualetti, R Ganzola, N Robitaille, S Duchesne, CR Jack, GB Frisoni and the EADC-ADNI Hippocampal Harmonization Group. Definition of Harmonized Protocol for Hippocampal Segmentation Abstract n. 26292, submitted to AIC 2012 M Boccardi, M Bocchetta, A Redolfi, P Pasqualetti, R Ganzola, N Robitaille, S Duchesne, CR Jack, GB Frisoni and the EADC-ADNI Hippocampal Harmonization Group. Definition of Harmonized Protocol for Hippocampal Segmentation

  15. SOPs periodical meetings AAN – April 24, 2012 AGENDA: 1. Delphi Paper; 2. Publication policy AAIC – July 2012 AGENDA: 1. Presentation of Harmonized Protocol; 2. Reliability figures

  16. GANTT

More Related