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HPC in Poland 2008+

HPC in Poland 2008+. Marek Niezgódka ICM, University of Warsaw marekn@icm.edu.pl. HPC in Poland: profiling. Research and academia, new opening since 1993: ICT infrastructure: 1st strategy as of 1993 Operational HPC centers set up (5, in total: Gdańsk, Cracow, Poznań, Wrocław and Warsaw)

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HPC in Poland 2008+

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  1. HPC in Poland 2008+ Marek Niezgódka ICM, University of Warsaw marekn@icm.edu.pl

  2. HPC in Poland: profiling • Research and academia, new opening since 1993: • ICT infrastructure: 1st strategy as of 1993 • Operational HPC centers set up (5, in total: Gdańsk, Cracow, Poznań, Wrocław and Warsaw) • Dedicated HPC infrastructure for Grid environments: • Special LHC-dedicated resources • IT Industry R&D centers: IBM, Intel, HP, … • Business and industry: • Mostly service organizations • Telecom and finances • Data centers M. Niezgódka, HPC Forum 2008

  3. HPC in academia: status TASK Gdańsk: • Intel Xeon QuadCore 2.33GHz cluster: • 5376 cores, 10 TB RAM, 107 TB storage • Intel Itanium2 DualCore 1.4 GHz cluster: • 576 cores, 2.3 TB RAM, 5.8 TB storage • SGI Altix 3700: • 128 * Intel Itanium2 1.5 GHz M. Niezgódka, HPC Forum 2008

  4. HPC in academia: status WCSS Wrocław: • Intel Xeon DualCore cluster: • 1696 cores, 3.4 TB RAM, 70 TB storage • SGI Altix 3700 Bx2: • 128 * Intel Itanium2 1.5 GHz M. Niezgódka, HPC Forum 2008

  5. HPC in academia: status ACK Cyfronet, Cracow • IBM BladeCenter HS21: • 56 nodes: 2* Intel Xeon DualCore 2.66 GHz • IBM BladeCenter HS21: • 49 * 2 processors blades (392 cores), Intel Xeon QuadCore 2.33 GHz • SGI Altix 3700: • 128 * Intel Itanium2 1.5 GHz • LCG2 cluster: • 188 nodes: 2* Intel Xeon 2.4-2.8 Ghz M. Niezgódka, HPC Forum 2008

  6. HPC in academia: status PCSS Poznań: • Quad-Core Intel Xeon E5345 cluster • total: 1000 cores • Sun Fire V20z AMD Opteron 275 cluster • total: 170 cores • SGI Altix Origin 3800 IA-64 128 nodes • SGI Altix Origin 3000 • SGI Altix Origin 3700 M. Niezgódka, HPC Forum 2008

  7. HPC in academia: status ICM, Warsaw: „Old” infrastructure • Cray X1E, 128 * SSP • IBM eServer 325 cluster: • 98 nodes * AMD Opteron 246 DualCore • Sun v40z cluster: • 12 nodes, each 4 * AMD Opteron 875 DualCore • 4 * Sun x4600, 8 * AMD Opteron 875 • Disk storage NetApp 200 TB (effective) M. Niezgódka, HPC Forum 2008

  8. HPC in academia: status ICM, Warsaw: „New” infrastructure, 2008 • SUN Constellation cluster (in total,6912 cores) • 9 * chassis * 48 blades • each blade: 8 * QuadCore AMD Opteron 835416 GB RAM per node, InfiniBand interconnected • Storage: SUN Thumper cluster: • 8* 24 TB + 8 * 36 TB = 480 TB • 8 * 288 TB = 2.304 PB(Q4,2008) • IBM BladeCenter H (hybrid): • 90 * QS22 blades: • 2 * PowerXCell 8i, 8/32 GB RAM each • 20 * LS21 blades: • 2 * AMD Opteron 2222, 32 GB RAM (10,2008) M. Niezgódka, HPC Forum 2008

  9. Poland: HPC related research • Different profiles of 5 HPC operational centers • Computational science research: • strong interdisciplinary orientation at ICM, with direct coupling to experimental labs • industrial collaborations in education and R&D: joint IBM-ICM competence center for Cell technology, an example • Primarily R&D related to middleware layer at other centers, driven by Grid programs (EU FP5-7) • Extensive involvement in EGEE programs, with high interest in High-Energy Physics community in LHC data processing M. Niezgódka, HPC Forum 2008

  10. ICM, an Open Science center • Open source HPC software offer: • VisNow: modular visual modelling and computing platform with broad-range applicability • MolDyana: specialized modular visual modelling and computing platform for molecular and macromolecular scale applications • In addition: Yadda, an integrated software platform for open publishing and federated repositories, with extensive content processing and analysis functionality • The latter technology adopted for EU DRIVER platform for science repositories, system for Poland currently under implementation M. Niezgódka, HPC Forum 2008

  11. Poland: current planning period for HPC infrastructure • Available funding dedicated to ICT infrastructures for academia: 270+ MEuro within 2008, 2009 and 2010 calls • In addition, funding for large research infrastructures: total appr. 1.6 BEuro for same period • Complementary funds available for innovative ICT based services (general) M. Niezgódka, HPC Forum 2008

  12. Example: University of Warsaw • ICM, a unit within the University of Warsaw • 2008 call: two large ICT infrastructure projects submitted, in addition, partnership in some complementary projects • 2009-10 calls: further actions in planning • Integrating frame: • CeNT, Center for New Technology, with starting funds appr. 90 MEuro: • New facility under construction, including substantial enhancement for HPC operations and programs • Shares in CePT, Center for Preclinical Research and Technology, funds appr. 30 MEuro M. Niezgódka, HPC Forum 2008

  13. CeNT: some underlying concepts • Project-driven postgraduate and PhD proactive education programs and post-doc leadership offer • Strong interdisciplinarity • Coexistence of experimental and computational research, at first in: • Biotechnology, biomedical disciplines • Materials, incl. applications in: • bionano, • energy, • environmental sensing and safety • ICM strongly involved M. Niezgódka, HPC Forum 2008

  14. CeNT: structure M. Niezgódka, HPC Forum 2008

  15. ICM: directions in HPC • Hybrid architectures for functional decomposition of computational models • Improved scalability of production codes • Further development of adaptive visual computing pre- and postprocessing solutions • Native solutions for specific classes of applications: • Population dynamics and structure formation with coupled driving mechanisms over complex environments • Biomedical diagnostics in distributed systems M. Niezgódka, HPC Forum 2008

  16. HPC in Poland: directions • Fostered by needs of new innovative technologies and economy, industry-academia partnerships (and clusters) • Role of novel distributed services, demonstrable impact on DSS in complex applications • Strong proenvironmental orientation: preference to greening technologies, otherwise power shortage and released heat polluting environment M. Niezgódka, HPC Forum 2008

  17. ICM: contacts Marek Niezgódka: • Direct: marekn@icm.edu.pl • Or, better, via, hannasz@icm.edu.pl rsot@icm.edu.pl WWW: www.icm.edu.pl M. Niezgódka, HPC Forum 2008

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