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Ansuman Chattopadhyay , PhD Head, Molecular Biology Information Services

Molecular Biology Information Service. Ansuman Chattopadhyay , PhD Head, Molecular Biology Information Services Health Sciences Library System University of Pittsburgh. Information Overload. 4,500 Journals. p53. http://www.hsls.pitt.edu/guides/genetics. Organism Whole Genome Sequences.

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Ansuman Chattopadhyay , PhD Head, Molecular Biology Information Services

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  1. Molecular Biology Information Service AnsumanChattopadhyay, PhD Head, Molecular Biology Information Services Health Sciences Library System University of Pittsburgh

  2. Information Overload 4,500 Journals • p53 http://www.hsls.pitt.edu/guides/genetics

  3. Organism Whole Genome Sequences 2001 2010 http://www.hsls.pitt.edu/guides/genetics

  4. Molecular Biology Information Service http://www.hsls.pitt.edu/guides/genetics

  5. Libraries that Offer Molecular Biology Information Services Program • Health Sciences Library System • University of Pittsburgh • Health Sciences Libraries • University of Washington • Countway Medical LibraryHarvard Medical School • Bernard Becker Medical LibraryWashington University in St. Louis School of Medicine • Norris Medical Library University of Southern California • Health Science Center Libraries University of Florida http://www.hsls.pitt.edu/guides/genetics

  6. Molecular Biology Information Service Carrie Iwema, PhD • 1990-1996 • University of Nebraska-Lincoln • PhD. in Biochemistry 2002 2007 2010 • 1997-2001 • Vanderbilt University School of Medicine, • Nashville • Research Fellow 2004 2009 • 2001-2002 • Cellomics Inc., Pittsburgh • Knowledge Engineer Katrina Kurtz, MLIS Yi-Bu Chen, PhD • 2002- 2006 • Information Specialist in Molecular Biology • and Genetics • HSLS, University of Pittsburgh • 2006- Present • Head, Molecular Biology Information Service • HSLS, University of Pittsburgh http://www.hsls.pitt.edu/guides/genetics

  7. A Four-Pronged Program http://www.hsls.pitt.edu/guides/genetics

  8. HSLS MolBio Web Portal http://www.hsls.pitt.edu/guides/genetics

  9. Protocols: http://www.hsls.pitt.edu/guides/genetics

  10. HSLS Licensed Tools http://www.hsls.pitt.edu/guides/genetics

  11. High Through-Put Data Analysis GeneSpring/ArrayAssist Statistical packages • Ingenuity IPA • GeneGOMetacore • Explain Literature findings Biology http://www.hsls.pitt.edu/guides/genetics

  12. Discovery Step • Gene List • Biological functions • Canonical Pathways • Interaction Networks http://www.hsls.pitt.edu/guides/genetics

  13. Common Functions and Pathways: IPA Analysis http://www.hsls.pitt.edu/guides/genetics

  14. Pathway Map: NFkB and TGF beta http://www.hsls.pitt.edu/guides/genetics

  15. Metacore: Analyze Network (receptors) p53 C-Myc http://www.hsls.pitt.edu/guides/genetics

  16. Licensed Tools 2004 2006 2008 2010 2002 2003 2005 2007 2009 http://www.hsls.pitt.edu/guides/genetics

  17. Library Licensed Tools http://www.hsls.pitt.edu/guides/genetics

  18. HSLS Bioinformatics Workshops http://www.hsls.pitt.edu/guides/genetics

  19. Bioinformatics Workshops • 12 topics / semester • 6 health sciences schools • attendees / year : ~ 370 2006 2007 2008 2009 http://www.hsls.pitt.edu/guides/genetics

  20. HSLS Mol Bio Homepage Hits http://www.hsls.pitt.edu/guides/genetics

  21. Thank you!

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