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http://bahrain.cochrane.org http://www.rt.ae. Cochrane Collaboration and Systematic Review Workshop, 20-21 February 2007, Dubai - UAE. The Bahrain Branch of the UK Cochrane Centre In Collaboration with Reyada Training & Management Consultancy, Dubai-UAE. W04.
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http://bahrain.cochrane.org http://www.rt.ae Cochrane Collaboration and Systematic Review Workshop, 20-21 February 2007, Dubai - UAE The Bahrain Branch of the UK Cochrane Centre In Collaboration with Reyada Training & Management Consultancy, Dubai-UAE W04 Dr. Zbys Fedorowicz, Dr. Dunia Al Hashimi, Dr. Ahmed Al Asfoor
1/SE “funnel” ofunbiasedstudies region ofp>0.05 0 non-sig.missingstudies effectmagnitude Basic Concepts • Statisticsis the methodology of collecting, organizing, analyzing and interpreting data • Descriptive statistics: presentation of data in graphs and tables, calculation of numerical summaries • Inferential statistics: methodology for arriving or making decisions about a population by reasoning from the evidence of observed numerical data from a sample of the population
Test of hypothesis Example • A clinical trial for prevention of infant hypocalcaemia in which pregnant women receiving vitamin D supplement were compared with untreated women. The infant’s plasma calcium concentration measured six days after birth was of principal interest
NullHypothesis AlternativeHypothesis • Have to start with a hypothesis • Usually we start with “No effect or difference” • May end up with “There is an effect or a difference” • Accept / Reject considering the role of chance
The p-value The P-value is the probability of the observed data or more extreme outcome would have occurred by chance alone if the null hypothesis (null value) is true Small p-values mean the null value is unlikely given our data. Significant result Small P-values Non-significant result Large P-values
The p-value Infant 6th day plasma calcium (mg per 100ml) mean sd Vitamin D (n=233) 9.36 1.15 Control (n=394) 9.01 1.33 Could the difference (=0.35) between the two samples be due to sampling variation, or are they statistically significant (Very unlikely to be due to chance alone) ? P-value< 0001 Under the null hypothesis the chances of getting such a difference are less than 1 in 1000
Estimation and confidence limits • Main purpose of a clinical trial should be to estimate the magnitude of improvement of one treatment over another • Significance tests give the strength of evidence for one treatment being better they do not tell how much better • Significance tests P-value (not an estimate of any quantity; tell nothing about the size of a difference; tell nothing about the direction of a difference) • Statistical estimation methods – confidence intervals
95% CI X = TRUE VALUE (--------------------X-----------------) (-------- X-------------------------) (---------------------X----------------) X (-----------------------------------) (-----------------X----------------) (----------------------X----------------) (----X---------------------------------) 95% CI should contain true value ~ 19/20 times
95% CI Infant 6th day plasma calcium (mg per 100ml) mean sd Vitamin D (n=233) 9.36 1.15 Control (n=394) 9.01 1.33 Could the difference (=0.35) between the two samples be due to sampling variation, or are they statistically significant (Very unlikely to be due to chance alone) ? 95% CI for the difference in means (0.15, 0.55) There are 1 in 20 chances that the true diff is outside these limits
Types of data for outcome • Dichotomous (or binary) data, where each individual’s outcome is one of only two possible categorical responses; • Continuous data, where each individual’s outcome is a measurement of a numerical quantity; • Ordinal data (including measurement scales), where the outcome is one of several ordered categories, or generated by scoring and summing categorical responses;
Types of data for outcome • Counts and rates calculated from counting the number of events that each individual experiences; • Time-to-event (typically survival) data that analyze the time until an event occurs, but where not all individuals in the study experience the event (censored data).
Effect measures Dichotomous outcome Example: Dead or alive; clinical improvement or no clinical improvement • Risk ratio (RR) (also called the relative risk) • Odds ratio (OR) • Risk difference (RD) (also called the absolute risk reduction, ARR) • Relative risk reduction (RRR) • Number needed to treat (NNT)
Risk and odds Riskis the probability with which a health outcome (usually and adverse effect) will occur • Risk = 0.1 --- 10 out of 100 will have the event Oddsis the ratio of the number of people with the event to the number without • Odds are 1:10, or 0.1 --- 1 person will have the event for every 10 who do not
number of events Risk = total number of observations risk in Exp group (EER) Risk Ratio (RR) = risk in control group (CER) ? = 0.15/ 0.20 = 0.75 Event rates a b c d Risk in Exp group? Risk in Control group? 15/100 = 0.15 20/100 = 0.20 Experimental Event Rate (EER) Control Event Rate (CER)
RR = 0.75 Probability of an event with treatment is three-quarters of that without the treatment RR = 1 Probability of an event with treatment is the same as that without the treatment RR = 1.3 Events with treatments are 30% more likely than events without the treatment
80 80 85 80 20 20 15 20 IN ABSOLUTE TERMS BY 0.25 OR 25 % EER = 0.15 = 0.75 RR = CER = 0.20 BY 0.3 OR 30 % EER = 0.20 EER = 0.20 RR = RR = = 1.0 = 1.3 CER = 0.20 CER = 0.15 a b c d a+b c+d IN RELATIVE TERMS BY 0.20 – 0.15 = 0.05 OR 5 % BY 0.15 – 0.20 = - 0.05 OR 5 %
Event rates - Odds Ratio (OR) number of events Odds = number without the event odds in Exp group (EER) Odds Ratio (OR) = odds in control group (CER) ? = 0.18 / 0.25 = 0.72 a b c d a+b c+d Odds in Exp group? Odds in Control group? 15/85 = 0.18 20/80 = 0.25 Experimental Event Rate (EER) Control Event Rate (CER)
Health care interventions are intended either to reduce the risk of occurrence of an adverse outcome or increase the chance of a good outcome • A trial in which the experimental intervention reduces the occurrences of an adverse event will have an odds ratio and risk ratio lessthan one and a negativerisk difference • A trial in which the experimental intervention increases the occurrences of a good outcome will have an odds ratio and risk ratio greater than one and a positiverisk difference
Trial- Treatment of MI • New drug for acute myocardial infarction to reduce mortality • 40% mortality rate at 30 days among untreated
Trial- Treatment of MI • New drug for acute myocardial infarction to reduce mortality • 40% mortality rate at 30 days among untreated • 30% mortality among treated How would you describe the effect of the new drug? RR = 30 / 40 = 0.75 ARD = 40 – 30 = 10% RRR = 100 ( 1 – RR ) = 25%
Number needed to treat (NNT) • In considering the consequences of treating OR not treating, another sure of risk is the NNT • NNT is the number of patients who would have to receive the treatment for 1 of them to benefit
Concept • If a disease has a mortality rate of 100% without treatment. • Therapy reduces the mortality to 50% • How many people would you need to treat to prevent one death? • Treating 100 patients with otherwise fatal disease resulted in 50 survivors • 1 out of every 2 treated • Since all were destined to die • THE NNT TO PREVENT 1 DEATH IS 2 • NNT = 1 / ARD
Effect measures Continuous outcome Example: weight, heart rate • The mean difference • The standardized mean difference • Used in meta analysis when the trials assess the same outcome, but measure it in a variety of ways (for example, all trials measure depression but they use different psychometric scales).
Effect measures Time-to-event (survival) outcomes • Sometimes analyzed as dichotomous data • Appropriate measure is the hazard ratio • Interpreted in a similar way to a risk ratio • Describes how many times more (or less) likely a participant is to suffer the event at a particular point in time if they receive the experimental rather than the control intervention