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Helping Interdisciplinary Vocabulary Engineering with Amy Zanne and Ryan Scherle

Meet Amy Zanne, a botanist who publishes and deposits data in Dryad. Learn about their interdisciplinary vocabulary assessment and mapping work with terms from evolution journals. Explore how the vocabulary maps to LCSH, MeSH, and NBII Thesaurus.

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Helping Interdisciplinary Vocabulary Engineering with Amy Zanne and Ryan Scherle

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  1. Helping Helping Interdisciplinary Vocabulary Engineering Ryan Scherle – National Evolutionary Synthesis Center Jose Aguera – University of North Carolina

  2. Meet Amy Amy Zanne is a botanist.

  3. Meet Amy Amy Zanne is a botanist. Like every good scientist, she publishes.

  4. Meet Amy Amy Zanne is a botanist. Like every good scientist, she publishes. She deposits data in Dryad.

  5. Vocabulary assessment 600 sample terms from evolution journals 33% map to LCSH 23% map to MeSH 22% of terms map to NBII Thesaurus

  6. Vocabulary assessment 600 sample terms from evolution journals 33% map to LCSH 23% map to MeSH 22% of terms map to NBII Thesaurus Only 9% of terms appeared in more than one vocabulary!

  7. SKOS <rdf:RDF> <rdf:Description rdf:about="http://thesaurus.nbii.gov/nbii#Wood-pulp"> <rdf:type rdf:resource="http://www.w3.org/2004/02/skos/core#Concept"/> <skos:prefLabel>Wood pulp</skos:prefLabel> <skos:altLabel>Pulp (wood)</skos:altLabel> <skos:broader rdf:resource="http://thesaurus.nbii.gov/nbii#Wood”/> <skos:related rdf:resource="http://thesaurus.nbii.gov/nbii#Paper”/> <skos:related rdf:resource="http://thesaurus.nbii.gov/nbii#Paper-industry-wastes”/> <skos:related rdf:resource="http://thesaurus.nbii.gov/nbii#Pulp-mills”/> <skos:related rdf:resource="http://thesaurus.nbii.gov/nbii#Sawdust”/> <skos:inScheme rdf:resource="http://thesaurus.nbii.gov/nbii#"/> <skos:scopeNote>LSC Life Sciences</skos:scopeNote> </rdf:RDF>

  8. Vocabularies Library of Congress (LCSH) US Geological Survey (NBII) The Getty Research Institute (TGN) Long Term Ecologial Research Network Others (Agrovoc, MeSH, TTO, etc.)

  9. Code4Lib 2010

  10. Architecture Web UI (GWT) Web Services HIVE Core Dummy Indexer Term Frequency POS Tagger Normalize KEA Indexer http://www.nzdl.org/Kea/ Lucene with BM25F Sesame RDF Store

  11. Using HIVE yourself Demo server (with caveats: http://hive.nescent.org:9090 Use the code directly (more caveats): http://hive-mrc.googlecode.com Coming soon! Web services: HIVE API, SPARQL, SRU

  12. Thanks to… HIVE team members: Jane Greenberg Lina Huang Robert Losee Todd J. Vision Hollie White Vocabulary partners and advisory board HIVE is supported by IMLS Grant LG-07-08-120-08 and NSF grants DBI-0743720, EF-0423641

  13. To learn more… http://www.nescent.org/sites/hive http://hive.nescent.org:9090 http://hive-mrc.googlecode.com http://datadryad.org

  14. END

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