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Introduction to NCRR Center. NCRR Center for Bioelectric Field Modeling, Simulation, and Visualization. Aims of NCRR Center. Develop and Implement : An integrated, extensible, problem-solving environment (BioPSE) Geometric modeling tools Bioelectric field simulation tools
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Introduction to NCRR Center NCRR Center for Bioelectric Field Modeling, Simulation, and Visualization
Aims of NCRR Center • Develop and Implement : • An integrated, extensible, problem-solving environment (BioPSE) • Geometric modeling tools • Bioelectric field simulation tools • Visualization methods and tools
Objectives of NCRR Center • Disseminate or Provide: • State-of-the-art software developed within the Center • An on-line database of geometric models and simulation data • Short courses on the use of Center software tools • Workshops on bioelectric field research
Center Organization Chart Associate Directors External Advisory Board Director (C. Johnson and R. MacLeod) (G.Jones, Ph.D. ) Administrator (A. Betancourt) Technical Manager Collaborators ( D. Weinstein) Media Systems Specialist (R. Cummins) (R. Coffey) Visualization PSE Software Modeling Simulation Research Research Engineering Research Research (C. Hansen. Ph.D.) (S. Parker, Ph.D.) D. De St. Germain (C. Johnson, Ph.D.) (R. MacLeod, Ph.D.)
Model Core Sim Vis BioPSE BioPSE Interactivity Program Design Portability User Interface Integration Data Management Extensibility
map3d • Summary Goals Proposed research Spatiotemporal view map3d Model Provide quantitative feedback Interactive interrogation Core Sim Vis BioPSE • Leverage • commodity • hardware Interactiveperformance
Software Releases • BioPSE • Version 1.20.1 November, 2003 • Open Source • Target platforms: • Linux, Irix, Mac OSX • Single and multiprocessors • map3d • Version 5.4 March, 2003 • Target platforms: • Linux, Windows, Irix, (Mac OSX)
Center Time Line • Started - September 15, 1999 • Fully Staffed - May, 2000 • 1st Code Release – February, 2001 • 1st EAB Meeting – April, 2001 • 432 BioPSE Downloads – Feb, 2002 • 4th Code Release – March, 2002 • 2nd EAB Meeting – March, 2002 • Renewal Site Visit – March, 2002 • 3rd EAB Meeting – July 2003 • 4th EAB Meeting – Spring 2004 • 5th EAB Meeting – March 2005 • Renewal Site Visit – March 2005
SCIRun downloads since Jan 2003: 807 BioPSE downloads since Jan 2003: 256 SCIRun downloads since initial release: 3500 BioPSE downloads since initial release: 1200 Successful hits for software.sci.utah.edu since Jan 2003: 633,441 Visits For software.sci.utah.edu since Jan 2003: 49,037 Successful Hits For www.sci.utah.edu since Jan 2003: 1,940,795 Visits For www.sci.utah.edu since Jan 2003: 162,158 Average time for visit: 5 minutes 20% of visitors visited more than once From 2002 to 2003, we have doubled the number of visitors to the software site. BioPSE Web Statistics
Immediate Goals • Deploy our software • Support science using the software • Renewal application 2004 • You Can Help!!