'Acgt' presentation slideshows

Comparative genomics to identify DNA binding motifs

Comparative genomics to identify DNA binding motifs. Saurabh Sinha Dept. of Computer Science University of Illinois, Urbana-Champaign. Outline. Binding sites and motifs The motif finding problem in one species Comparative genomics and alignment

860 views • 70 slides

Comparative genomics to identify DNA binding motifs

Comparative genomics to identify DNA binding motifs. Saurabh Sinha Dept. of Computer Science University of Illinois, Urbana-Champaign. Outline. Binding sites and motifs The motif finding problem in one species Comparative genomics and alignment

955 views • 70 slides

Gibbs Sampling in Motif Finding

983 views • 45 slides

Discovery of Regulatory Elements by a Phylogenetic Footprinting Algorithm

Discovery of Regulatory Elements by a Phylogenetic Footprinting Algorithm. Mathieu Blanchette Shane Neph Martin Tompa Computer Science & Engineering University of Washington. Outline. How are genes regulated? What is phylogenetic footprinting? First solution Improvements and extensions

481 views • 24 slides

Discovery of Regulatory Elements by a Phylogenetic Footprinting Algorithm

Discovery of Regulatory Elements by a Phylogenetic Footprinting Algorithm. Mathieu Blanchette Martin Tompa Computer Science & Engineering University of Washington. Outline. How are genes regulated? What is phylogenetic footprinting? First solution Improvements and extensions

433 views • 23 slides

Challenges for computer science as a part of Systems Biology

Challenges for computer science as a part of Systems Biology. Benno Schwikowski Institute for Systems Biology Seattle, WA. Towards integrative models. Species. Conditions/time. Genes. DNA Sequence Genomic locus Domain content Intron/exon structure Regulatory motifs

285 views • 19 slides

Challenges for computer science as a part of Systems Biology

Challenges for computer science as a part of Systems Biology. Benno Schwikowski Institute for Systems Biology Seattle, WA. Towards integrative models. Species. Conditions/time. Genes. DNA Sequence Genomic locus Domain content Intron/exon structure Regulatory motifs

199 views • 19 slides