'Microarray data analysis' presentation slideshows

Models for Integrating Statistics in Biology Education

726 views • 61 slides

Evaluation of Signaling Cascades Based on the Weights from Microarray and ChIP-seq Data

614 views • 49 slides

Agenda

Agenda. Dimension reduction Principal component analysis (PCA) Multi-dimensional scaling (MDS) Microarray visualization. Why Dimension Reduction. Computation: The complexity grows exponentially with the dimension. Visualization: projection of high-dimensional data to 2D or 3D.

579 views • 42 slides

Gene expression and the transcriptome I

Gene expression and the transcriptome I. Genomics and transcriptome. After genome sequencing and annotation, the second major branch of genomics is analysis of the transcriptome

566 views • 42 slides

MIcroarray Data Analysis System (version 2.19 )

632 views • 40 slides

Microarray Data Analysis - A Brief Overview

Microarray Data Analysis - A Brief Overview. R Group Rongkun Shen 2008-02-11. R is an environment and a computer programming language R is free, open-source, and runs on UNIX/Linux, Windows and Mac R language has a powerful, easy-to-learn syntax with many built-in statistical functions

515 views • 36 slides

Sparse Principal Component Analysis

Sparse Principal Component Analysis. Zou, Hastie, Tibshirani. presented by Banu Dost. Outline. Microarray expression data PCA on expression data SPCA Definition Motivation Method Linear regression Lasso/elastic net 2 Examples. DNA Microarrays. Gene Protein

1.33k views • 33 slides

An Evaluation of Microarray Visualization Tools for Biological Insight

Purvi Saraiya Chris North Dept. of Computer Science Virginia Polytechnic Institute and State University. Karen Duca Virginia Bioinformatics Institute Virginia Polytechnic Institute and State University. An Evaluation of Microarray Visualization Tools for Biological Insight.

412 views • 31 slides

Fusing Results from Microarray Experiments

450 views • 31 slides

Why do we do exploratory data analysis?

523 views • 31 slides

Bench-Marking in 3D Electron Microscopy

Bench-Marking in 3D Electron Microscopy. ISBI Challenges. It aims to establish the state-of-the-art in microarray data analysis, as well as identify progress and highlight promising directions for future efforts. CAMDA.

424 views • 28 slides

Luiza Handschuh Karol Marcinkowski University of Medical Sciences, Department of Haematology

VIRTUAL LABORATORY AND ITS APPLICATION IN GENOMICS. Luiza Handschuh Karol Marcinkowski University of Medical Sciences, Department of Haematology Institute of Bioorganic Chemistry PAS, Center of Excellence for Nucleic Acid-based Technologies INGRID 2008, Lacco Ameno, 11.04.2008.

369 views • 26 slides

Gene Ontology Project geneontology/

Gene Ontology Project http://www.geneontology.org/. Who is citing GO?. 450. 1063 publications over 284 Journals. http://www.geneontology.org/cgi-bin/biblio.cgi. Week ending 25th September 2006. National Institute on Alcohol Abuse and Alcoholism (NIAAA)

253 views • 24 slides

MGED IV Meeting Considerations in the Design of Local Research Microarray Databases

325 views • 22 slides

MGED IV Meeting Considerations in the Design of Local Research Microarray Databases

230 views • 22 slides

Gene Ontology Project geneontology/

Gene Ontology Project http://www.geneontology.org/. Clark et al ., 2005. is_a. part_of. Clark et al ., 2005. Who uses GO?. National Institute on Alcohol Abuse and Alcoholism (NIAAA) National Institute on Aging (NIA) National Institute of Allergy and Infectious Diseases (NIAID)

306 views • 18 slides

CAMDA becomes itinerant... CAMDA 07 Valencia Spain

CAMDA becomes itinerant... CAMDA 07 Valencia Spain. CAMDA 07 CIPF, Valencia, Spain. East coast of Spain, mediterranean warm wheather. Modern city with near 1M inhabitants. Agroalimentary industry (oranges, rice), R&D and biomedicine Rich gastronomy (paella)

457 views • 16 slides

Challenges in Computational & Functional Genomics

331 views • 15 slides

Course Outline

Course Outline. Overview of probability and statistics Microarray data analysis Protein function analysis based on the homology model Protein structure analysis Protein docking. Introduction to Microarray Data Analysis. Microarray Data Analysis.

292 views • 15 slides

?????????

?????????. ???? / ??. Tumorgenesis nude mice model Disease animal model Gene therapy model Drug delivery animal model. ?????????. ???? / ??. 2D gel electrophoresis Protein identification:Tandem mass spectrometry [ESI/Q-TOF, MALDI-Q-TOF]: protein identification

209 views • 5 slides