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Sequence Alignment

Sequence Alignment. Outline. Alignment of pairs of sequence Local and global alignments Methods of alignments Dot matrix analysis Dynamic programming approach Use of scoring matrices and gap penalties Scoring matrices -- PAM and BLOSUM. What is sequence alignment?.

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Lecture 8

Bioinformatics. Lecture 8. Alignment of pairs of sequence Local and global alignment Methods of alignment Dynamic programming approach Use of scoring matrices and gap penalties PAM and BLOSUM Formal dynamic programming algorithm . Definition of sequence alignment.

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Particular amino acid pair - PowerPoint PPT Presentation

Sequence Alignment

Lecture 8