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Ultrametric distances - PowerPoint PPT Presentation

RNA Secondary Structure

RNA Secondary Structure. aagacuucggaucuggcgacaccc uacacuucggaugacaccaaagug aggucuucggcacgggcaccauuc ccaacuucggauuuugcuaccaua aagccuucggagcgggcguaacuc. Decoding: the CYK algorithm. Given x = x 1 ....x N , and a SCFG G, Find the most likely parse of x

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542 views • 44 slides

Phylogeny Tree Reconstruction

1. 4. 3. 5. 2. 5. 2. 3. 1. 4. Phylogeny Tree Reconstruction. Inferring Phylogenies. Trees can be inferred by several criteria: Morphology of the organisms Sequence comparison Example: Orc: A C A G T G A C G CCCC AAA C G T Elf: A C A G T G A C G C T A C AAA C G T

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488 views • 40 slides

Bioinformatics Algorithms and Data Structures

Bioinformatics Algorithms and Data Structures. Chapter 17.1: Strings and Evolutionary Trees Lecturer: Dr. Rose Slides by: Dr. Rose April 8, 2003. Strings and Evolutionary Trees.

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443 views • 37 slides

Bioinformatics Algorithms and Data Structures

Bioinformatics Algorithms and Data Structures. Chapter 17.1: Strings and Evolutionary Trees Lecturer: Dr. Rose Slides by: Dr. Rose April 4, 2007. Strings and Evolutionary Trees.

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373 views • 37 slides

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Ultrametric distances - PowerPoint PPT Presentation

RNA Secondary Structure

Phylogeny Tree Reconstruction

Bioinformatics Algorithms and Data Structures

Bioinformatics Algorithms and Data Structures