270 likes | 451 Views
Scaling relationships based on partition coefficients & body size have similarities & interactions. Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Bas@bio.vu.nl http://www.bio.vu.nl/thb /. Lyon, 2006/05/10. Contents. toxicokinetic models one-compartment, film
E N D
Scaling relationships based onpartition coefficients & body size have similarities & interactions Bas Kooijman Dept theoretical biology Vrije Universiteit Amsterdam Bas@bio.vu.nl http://www.bio.vu.nl/thb/ Lyon, 2006/05/10
Contents • toxicokinetic models • one-compartment, film • toxic effects • DEB theory • QSARs • body size scaling • similarities • interactions Lyon, 2006/05/10
1-compartment model For a given external concentration as function of time:
1,1-compartment model medium i interface medium j compound can cross interface between media with different rates vice versa
1,1 compartment model and Suppose while Conclusion: relationship between par values follows from model structure
n,n-compartment models compound can cross interface between media with different rates vice versa sub-layers with equal rates for all sub-layers
film models Steady flux approximation Kooijman et al 2004 Chemosphere57: 745-753
Elimination rate & partition coeff diffusivities low high 1 film 2 film log 10% saturation time slope = 0.5 slope = 0.5 log P01 log P01 Transition: film 1,1-compartment model Kooijman et al 2004 Chemosphere57: 745-753
Concentration ranges of chemicals • too little • def: variations in concentration come with variations in effects • enough • def: variations in concentration within this range hardly affect • physiological behaviour of individuals • too much • def: variations in concentration come with variations in effects • e.g. water concentration can be too much even for fish • no basic difference between toxic and non-toxic chemicals • “too little” and “enough” can have zero range for some chemicals • Implication: lower & upper NEC for each compound
Effects on organisms • Chemicals, parasites, noise, temperature affect organisms • via changes of parameters values of their dynamic energy budget • these values are functions of internal concentrations • Primary target: individuals • some effects at sub-organism level can be compensated (NEC) • Effects on populations are derived from that on individuals • individuals interact via competition, trophic relationships • Parameters of the energy budget model individual-specific • and (partly) under genetic control
Models for toxic effects • Three model components: • kinetics • external concentration internal concentration • example: one-compartment kinetics • change in target parameter(s) • internal concentration value of target parameter(s) • example: linear relationship • physiology • value of parameter endpoint (survival, reproduction) • example: DEB model
Dynamic Energy Budget theoryfor metabolic organisation • Uptake of substrates (nutrients, light, food) • by organisms and their use (maintenance, growth, • development, reproduction) during life cycle (dynamic) • First principles, quantitative, axiomatic set up • Aim: Biological equivalent of Theoretical Physics • Primary target: the individual with consequences for • sub-organismal organization • supra-organismal organization • Relationships between levels of organisation • Many popular empirical models are special cases of DEB
defecation feeding food faeces assimilation reserve somatic maintenance maturity maintenance 1- maturation reproduction growth maturity offspring structure Standard DEB scheme • Def “standard”: • 1 type of food • 1 type of reserve • 1 type structure • isomorphy
assimilation maintenance costs defecation feeding food faeces growth costs assimilation reproduction costs reserve hazard to embryo somatic maintenance 7 maturity maintenance 1- maint tumour induction 6 maturation reproduction u endocr. disruption growth 7 lethal effects: hazard rate Mode of action affects translation to pop level 8 maturity offspring structure tumour 6 Modes of action of toxicants
Change in target parameter Simplest basis: Change internal conc that exceeds internal NEC or with • Rationale • effective molecules • operate independently • approximation • for small effects
Effect on survival Effects of Dieldrin on survival of Poecilia killing rate 0.038 l g-1 d-1 elimination rate 0.712 d-1 NEC 4.49 g l-1 • Hazard model for survival: • one compartment kinetics • hazard rate linear in internal concentration
QSARs for tox parameters Slope = -0.5 Slope = 1 Slope = -1 10log elim rate, d-1 10log kill rate, mM-1 d-1 10log NEC, mM 10log Pow 10log Pow 10log Pow Assumption: Each molecule has same effect Alkyl benzenes in Pimephales Data from Geiger et al 1990 • Hazard model for survival: • one compartment kinetics • hazard rate linear in internal concentration
QSARs for tox parameters Slope = -0.5 Slope = 1 Slope = -1 10log elim rate, d-1 10log kill rate, mM-1 d-1 10log NEC, mM 10log Pow 10log Pow 10log Pow Benzenes, alifates, phenols in Pimephales Data from Mackay et al 1992, Hawker & Connell 1985 Assumption: Each molecule has same effect • Hazard model for survival: • one compartment kinetics • hazard rate linear in internal concentration
Covariation of tox parameters Slope = -1 10log NEC, mM 10log killing rate, mM-1 d-1 Pimephales Data from Gerritsen 1997
QSARs for LC50’s 10log LC50.14d, M 10log Pow 10log Pow LC50.14d of chlorinated hydrocarbons for Poecilia. Data: Könemann, 1980
Primary scaling relationships Dependent on max size K saturation constant Lb length at birth Lp length at puberty {pAm} max spec assim rate Independent of max size yEX yield of reserve on food v energy conductance [pM] volume-spec maint. costs {pT} surface-spec maint. costs [EG] spec structure costs ha aging acceleration partitioning fraction R reproduction efficiency maximum length Lm = {pAm} / [pM] Kooijman 1986 J. Theor. Biol.121: 269-282
Scaling of metabolic rate Respiration: contributions from growth and maintenance Weight: contributions from structure and reserve Structure ; = length; endotherms
Metabolic rate slope = 1 Log metabolic rate, w O2 consumption, l/h 2 curves fitted: endotherms 0.0226 L2 + 0.0185 L3 0.0516 L2.44 ectotherms slope = 2/3 unicellulars Log weight, g Length, cm Intra-species Inter-species (Daphnia pulex)
Von Bertalanffy growth rate 25 °C TA = 7 kK 10log von Bert growth rate, a-1 10log ultimate length, mm 10log ultimate length, mm At 25 °C : maint rate coeff kM = 400 a-1 energy conductance v = 0.3 m a-1 ↑ ↑ 0
SimilaritiesQSAR body size scaling 1-compartment model: partition coefficient (= state) is ratio between uptake and elimination rate DEB-model: maximum length (= state) is ratio between assimilation and maintenance rate Parameters are constant for a system, but vary between systems in a way that follows from the model structure
InteractionsQSAR body size scaling • uptake, elimination fluxes, food uptake surface area (intra-specifically) • elimination rate length-1 (exposure time should depend on size) • food uptake structural volume (inter-specifically) • dilution by growth affects toxicokinetics • max growth length2 (inter-specifically) • elimination via reproduction: max reprod mass flux length2 (inter-specifically) • chemical composition: reserve capacity length4 (inter-specifically) • in some taxa reserve are enriched in lipids • chemical transformation, excretion is coupled to metabolic rate • metabolic rate scales between length2 and length3 • juvenile period length, abundance length-3 , pop growth rate length-1 • links with risk assessment strategies
DEB tele course 2007 Cambridge Univ Press 2000 http://www.bio.vu.nl/thb/deb/ Free of financial costs; some 250 h effort investment Feb-April 2007; target audience: PhD students We encourage participation in groups that organize local meetings weekly French group of participants of the DEB tele course 2005: special issue of J. Sea Res. 2006 on DEB applications to bivalves Software package DEBtool for Octave/ Matlab freely downloadable Slides of this presentation are downloadable from http://www.bio.vu.nl/thb/users/bas/lectures/ Audience: thank you for your attention Organizers: thank you for the invitation