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VMC4F8

CG01-fw. JM01-r2. CG01-co. JM01-r3. CG01(or). CG02-fw. JM02-r2. CG02-co. JM02-r3. CG02(or). VMC4F8. VMC4F8. VVS29. VMC4F8. VMC4F8. VVS29. VVS29. UDV109. UDV109. VMC4F9.2-DG-A. VMC4F9.2-DG-A. VVS29. VMC4F9.2-DG-A. VVIQ35. VMC4F9.2. VMC4F8. VMC4F9.2-DG-A. VVIQ35. VVIQ35.

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VMC4F8

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  1. CG01-fw JM01-r2 CG01-co JM01-r3 CG01(or) CG02-fw JM02-r2 CG02-co JM02-r3 CG02(or) VMC4F8 VMC4F8 VVS29 VMC4F8 VMC4F8 VVS29 VVS29 UDV109 UDV109 VMC4F9.2-DG-A VMC4F9.2-DG-A VVS29 VMC4F9.2-DG-A VVIQ35 VMC4F9.2 VMC4F8 VMC4F9.2-DG-A VVIQ35 VVIQ35 VMC8A7 VMC4F9.2-DG-A VMC4F9.2 VMC8A7 VVIC72 VMC8A7 VMC8A7 VMC4F9.2 VVIC72 VVIC72 UDV076 VMC8A7 VVIC72 UDV055 GT172H12 VVIB01 VMC4F9.2 VVIB01 UDV055 VVC19 VVIP12 UDV055 PGM UDV055 C008 C008 VVIP12 UDV076 VRZAG29 VVIB01 GT172H12 GT172H12 GT172H12 VVIB01 VVC19 VVIP12 VVMD34 VVIP12 VVMD34 VVMD34 VVC19 VVMD34 UDV036 PGM VRZAG29 VVC19 UDV036 C008 UDV027 VRZAG29 UDV036 UDV109 VRZAG29 VVIQ57 VVIQ57 VRZAG29 UDV027 UDV076 VVS3 C008 VVIB94 PGM UDV027 VVIQ57 VVIB23 UDV109 VVIB01 VVIB23 VVIQ57 VMCNG2G7 VVIB94 UDV036 VMC6F1 PGM VMC3B10 VMC3B10 VMC6F1 VVMD34 VVIB94 VMC3G9 VMCNG2G7 VMC3B10 VVIB94 VMCNG1H7 VMC6F1 UDV027 VMC6F1 VMC3B10 VMCNG2G7 VMCNG1H7 VMCNG2G7 VVIB23 VMC3G9 VMC3G9 VVIB23 VVIB23 VMCNG1H7 VMC3G9 VMCNG1H7 VVS3 VMCNG2G7 VVS3 VVS3 VVIP60 VMC3G9 VVIP60 VVIP60 VVIP60 VMC3B10 VVIP60 VMC7G5 VVMD26 VMCNG1H7 VVIO55 VMC6F1 VVMD26 VrZAG93 VMC7G5 VVMD26 VMC1H11.1 VVMD26 VrZAG93 VRZAG93 VVIO55 VRZAG93 VMC1H11.1 VVIO55 VMC7G5 VVIO02 VVIO55 VVIO02 VRZAG93 VVIN61 VMC7G5 VVIN61 VVIN61 VVIN61 VMC2C10.1 VMC2C10.1 VVIM25 VVIO02 VMC2C10.1 VMC2C10.1 VMC2C10.1 UDV086-DG-C VVIM25 VVIS21 VMC5G7 VVIN61 VVIS21 VVIO02 VVIM25 UDV086-DG-C VMC6B11 VVIM25 VVIM25 UDV086-DG-A UDV086-DG-C COLOR VVIS21 VMC6B11 UDV086-DG-C VMC6B11 UDV086-DG-A VMC4D2 VMC5G7 VMC5G7 VMC4D2 VVIU20.1 UDV086-DG-A VMC4D2 VMC1H11.1 VMC8D1 VMC5G7 VMC5G7 VMC8C2 UDV086-DG-C VMC2B3 VMC4D2 VVIS21 VMC6B11 VMC2B3 VMC6B11 VMC7G3 VMC4D2 VMC8D1 VMC8E8 COLOR VVIT60 VVIT60 VMC8C2 VVIT60 VMC2B3 VMC8E8 VMC8C2 VMC8E8 VVIU20.1 VMC8D1 VMC8E8 VVIU20.1 VMC9F2 COLOR COLOR VMC9F2 VMC8D1 VMC2B3 VVIT60 VVIO61 VVIU20.1 VMC8C2 VMC7G3 VMC2B3 VMC7G3 VMC9F2 VMC9F2 VVIF52 VMC8C2 VVIO61 VMC9F2 VVIO61 VVIO61 VMC9D3 VVIO61 VVIF52 VVIF52 VMC7G3 VVIF52 VMC7G3 VMC9D3 VMC9D3 VVIF52 VMC9D3 VMC9D3 0 10 20 S4 Comparison of the integrated maps obtained with CarthaGene and Joinmap. From left to right: CarthaGene framework map (with dsmergen), Joinmap map after second round, CarthaGene complete map (with dsmergen), Joinmap map after third round, CarthaGene complete map (with dsmergor: locus order only, no distances). For Joinmap maps, loci segregating ab x a0 or a0 x ab were removed. Scale (cM)

  2. CG04-fw JM04-r2 CG04-co JM04-r3 CG04(or) CG03-fw JM03-r2 CG03-co JM03-r3 CG03(or) VMC6G10 ADH2 ADH2 UDV093 UDV093 UDV061 VMC6G10 VMC6G10 UDV093 UDV061 UDV093 ADH2 ADH2 UDV061 VMC2E7 UDV093 VMC2E7 VRZAG83 UDV061 VMC2E7 VRZAG83 VMC8F10 UDV061 VMC8F10 VMC8F10 UDV021 VVIP77 VMC2E7 VMC2E7 VVIP77 UDV021 VMC1A5 VMC8F10 VVIT30 VVIT30 VRZAG83 VRZAG83 VMC1A5 UDV094 UDV021 VVIP37 VVIP37 UDV094 UDV043 VVIP77 VVIP77 VMC1A5 UDV021 VVMD32 UDV021 VVMD32 UDV043 UDV022 VVIT30 VVIT30 UDV094 VMC1A5 ADH2 VMC2E10 UDV022 VVMD36 B002 VVIP37 UDV043 VVIP37 UDV094 UDV094 VMC6G10 B002 VMC3F3 VMC3F3 UDV022 VVMD32 VVMD32 UDV043 UDV043 VVIP25.2 VRZAG83 VVMD36 VVIH02-D-C VVIP25.2 VMC3F3 VMC2E10 VMC2E10 VVIP77 VVIB59 UDV022 VMCNG1A9-R1-A VVIN75 VVMD36 B002 B002 VVIT30 VVIH02-D-C VVMD36 VMC9F4-D-C VVIB59 VVIP25.2 VVIP25.2 VVIP37 VMC2B5 VMC1G7 VMC1G7 VMC3F3 VMC2B5 VVIH02-D-C VVIN75 VVIN75 VVMD32 UDV022 VMC9F4-D-B VVIB59 VVIH02-D-C VMC1G7 VMC2B5 VMC2B5 VMC2E10 VMC9F4-D-C VVIH02-A1-C VMC9F4-D-C VMC9F4-D-B VRZAG21 VRZAG21 VRZAG21 B002 VMC9F4-D-A VMC1G7 VMC9F4-D-A VMC9F4-D-A VVIP25.2 VVMD36 VVIH02-A1-C VMC9F4-D-A VMC9F4-D-B VMC9F4-D-C VVIN75 VVIH02-D-B VVIH02-D-B VMC9F4-D-B VVIH02-A1-C VMC1G7 VRZAG21 VMC9F4-A1-A VMC9F4-A1-A VVIH02-D-B VMC9F4-A1-B VMC2B5 VVIB59 VMC9F4-A1-B VMC9F4-A1-B VVIB59 VVIN54 VMCNG2E1 VVIN54 VVIH02-A1-C VVIN54 VVMD28 VH43 VH43 VMCNG2E1 VH43 VVIN54 VVMD28 VMC9F4-A1-A VMC2E9 VMCNG1A9-R1-B VMC7H3 VMC7H3 VVMD28 VMCNG1A9-R1-B VMCNG1A9-R1-B VMC9F4-A1-B VMCNG2E1 VMC2E9 VMC7H3 VMC4D4 VMC4D4 VMC2E9 VVMD28 VMCNG1A9-R1-B VMC2E9-A2-A VMCNG2C2.1 VH43 VMC2E9-DG-A VVS112 VMC4D4 VVIN54 VMCNG1A9-R1-A VVIR46 VMC7H3 VMCNG2E1 VMC2E9-A2-A VMC2E9 VMC2E9-R1-A VMCNG2E1 VVIV61-A1-A VVIQ58 VMCNG1A9-R1-A VVIV61-A1-A VVMD28 VMC4D4 VMC2E9-R1-A VVS112 VMCNG1F1.1 VVIV61-A1-A VMC2E9-A2-A VMC2E9-DG-A VMC4D4 VMC2E9-R1-A VMC2E9-DG-A VMC2E9-A2-A VVIR46 VVIR46 VVIV61-A1-A VVIQ58 VVIQ58 VVS112 VMCNG1F1.1 VMCNG1F1.1 VMCNG1A9-R1-A VMCNG2C2.1 VMC2E9-R1-A VVIR46 VMCNG2C2.1 VMCNG2C2.1 VMCNG1F1.1 VVIR46 VVIQ58 VMCNG1F1.1

  3. CG05-fw JM05-r2 CG05-co JM05-r3 CG05(or) CG06-fw JM06-r2 CG06-co JM06-r3 CG06(or) VVC6 VVC6 VVII52 VMC3B9 VVC6 VMCNG4B9 VMC3B9 VVMD27 VVMD27 VVII52 VVIM43 VMCNG4B9 VVC6 UDV106 VVIM43 UDV106 VMC3B9 VVIM43 UDV060 VRZAG79 VVIN31 VVMD27 VVIN31 VRZAG79 VMCNG4B9 VMC3B9 UDV060 VVIN31 VVMD27 VVII52 VMC5G1.1 UDV042 VVMD27 UDV042 VMC5G1.1 UDV106 VMC3F12 VVIM43 UDV041 VVII52 UDV041 VMC3F12 UDV106 UDV060 VMC5G1.1 VMC2A9-A2 VMC5G1.1 UDV053 UDV106 VMC3A8 VMCNG4B9 VVIT68 VRZAG79 VVIP28 VRZAG79 VMC3F12 VMC3F12 VVIT68 UDV060 VRZAG30 VVIM43 UDV053 UDV042 VRZAG30 VMC2A9-A2 VMC3A8 VVIV21 VRZAG79 VVIV21 VVIP28 VVIN31 UDV041 VMC3A8 VMC4G6 VMC4G6 VVIN33 UDV042 VMC5G1.1 VMC3C7 VMC2A9-A2 VVIT68 VMC4G6 VVS5 VMC5E11 VVIT68 UDV041 VMC3F12 VMC5E11 VMC4G6 UDV053 VMC4H5 VVS5 VVMD21 VMC3C7 VVIT68 VMC4H5 VMC3A8 VVC71 VVIV21 VVMD21 VMC4H5 VMC6E10 UDV053 VVMD21 VVIP28 VVIN33 VVIN33 VMC4H5 VVMD14-D-B VMC3C7 VMC6E10 VVS5 VRZAG30 VMC5E11 VVMD14-DG-C VVIC50 VMC5E11 VMC2A9-A2 VVMD14-DG-A VMC2F10-D-A VMC3C7 VVMD14-DG-A VVC71 VMC4G6 VVMD14-DG-C VVIC50 VVIC50 VVC71 VVIC50 VVMD14-D-C VVIN33 VMC4H5 VVMD14-D-F VMC2F10 VMC5E11 VMC6E10 VMC16D4 VMC2F10 VMC2F10-D-A VMC6E10 VVMD14-D-B VVMD21 VMC3C7 VVMD14-D-B VVC71 VMC2F10 VVMD14-DG-A VVMD14-D-C VMC2F10-D-A VMC6E10 VVMD14-D-C VMC5C5 VMC2E9-A2-B VVMD14-D-F VVIC50 VMC16D4 VMC5C5 VVMD14-DG-C VMC2G2 VVMD14 VVMD14-D-B VMC2G2 VVS5 VMC9B5 VVMD14-D-F VVMD14-D-F VVMD14-D-C VMC2F10 VVMD14-D-D VMC2H9 VMC2H9 VMC16D4 VMC2G2 VVMD14-D-E VMC16D4 VVMD14-D-E VMC2G2 VMC2G2 UDV085 UDV085 VVMD14-DG-A VVMD14 VMC5C5 VMC9B5 VMC9B5 VVMD14 VMC5C5 VVMD14 VMC5C5 VVMD14-D-D VVS19 VMC2H9 UDV111-DG-A VMC9B5 VMC2H9 VVS19 VVMD14-DG-B UDV085 UDV111-DG-B VMC2H9 UDV111-DG-B UDV111-DG-B UDV064 VVIP72 VMC9B5 VVMD14-DG-B UDV111-DG-A UDV085 UDV111-DG-A VVMD14-DG-D VVS19 UDV090 VVMD14-D-E VVMD14-DG-B VMC2E9-DG-B VVMD14-D-A VVIP72 VVMD14-D-D VVIP72 UDV064 UDV111-DG-B UDV064 VVMD14-DG-B VVS19 VVMD14-DG-D UDV111-DG-A VMC2E9-DG-B UDV064 VMC2E9-DG-B VVMD14-D-A VVMD14-DG-D VVMD14-DG-D UDV090 UDV090 VVIN40 VMC4C6 VVIN40 VMC2E9-DG-B VVIP72 VMC2E9-R1-B VMC2E9-A2-B VMC4C6 VMC4C6 VVIP72 VMC2E9-A2-B VVMD14-D-A VMC5F2 VMC2E9-A2-B VVMD14-D-A VMC4C6 VMC2E9-R1-B VMC5F2 VVS19 VMC5F2 VMC2E9-R1-B UDV090 VMC2E9-R1-B VVIN40 VMC4C6 VMC5F2

  4. CG07-fw JM07-r2 CG07-co JM07-r3 CG07(or) CG08-fw JM08-r2 CG08-co JM08-r3 CG08(or) VMC16F3 VMC2H10 VMC16F3 VVMD7 VVMD7 VMC16F3 VMCNG2B6 VMC16F3 VMCNG2B6 VVMD7 UDV011 VVMD7 VMC2H10 VRZAG62 VMCNG2B6 A47D UDV011 UDV011 VMCNG2B6 A47D UDV011 VVIB66 VVIB66 VMC4D3 VMC4D3 A47D VRZAG62 VMC4D3 VRZAG62 VMCNG2B6 A47D VVIB22 VVIB66 VVIQ36 VVIQ36 VMC2H10 VVIB66 VVMD6 VVIB22 VMC3F8 VMC3F8 A47D VMC4D3 VVMD6 VMC3C9 VMC3C9 VVMD6 VVMD6 VMC3C9 VVIB66 VMC5H5 VMC3F8 VMC1E8 VMC1E8 VMC5H5 VMC16F3 VMC5H5 VMC1E8 VMC3F8 VMC5H5 VMC3C9 VMC5H2 VMC4F9.2-DG-B VVMD7 VMC4F9.2-DG-B VMC3C9 VMC4F9.2-DG-B VMC1E8 VMCNG2E2 VVIB22 VRZAG62 VVIQ36 VMC5H2 VMC5H2 VMC5H2 VMC1B11 VVMD31 VVMD31 VVIB22 VMC1E8 VVMD31 VMC9F4-A1-C VVIS58 UDV011 VMCNG2E2 VMC5H2 VMCNG2E2 VMCNG2E2 VVIV36 VVIS58 VVIH02-D-A VVMD6 VMC1A2 VMCNG2E2 VVIS58 VMC7A4 VMC9F4-D-D VMC5H5 VMC1B11 VMC1B11 VMC7A4 VMC1B11 VVS4 VMC4F9.2-DG-B VMC1B11 VMC9F4-D-D VMC7A4 VMC1A2 VMC9A3.1 VMC7H2 VVMD31 VVIH02-D-A VMC9A3.1 VMC1A2 VVIV36 VMC1A2 VVIH02-A1-A VMC7A4 VVIH02-A1-A VMC5G6.1 VVIS58 VVIV36 VVIM07 VVS4 VMC9A3.1 VMC9F4-D-D VVIM07 VMC1A2 VMC5G6.1 VMC9A3.1 VMC7H2 VVIH02-A1-A UDV125 VMC9A3.1 VMC7H2 VMC5G6.1 VVIH02-A1-A VVIH02-D-A VVIV15.1 VVIV36 VVS4 VVIM07 VMC5G6.1 VVIV15.2 VMC8D11 VMC3G7 VMC5G6.1 UDV125 VVIM07 VMCNG2H2.2 VMC1A12 VVIV15.1 VVIV15.1 VMC7H2 VMC8D11 VMC3G7-A1-A VVIQ67 UDV125 VMC8D11 VVIV15.2 VVS4 VMC3G7-A1-B VVIV15.2 VVIP75 VVIV15.2 VMCNG2H2.2 VVIV15.1 UDV075 VVIV04 VMC3G7-A1-A VMC3G7-A1-A VMC3G7-A1-A VMC8D11 VVIV15.2 VMC3G7 VVIN56 VMC3G7-A1-B VMC3G7-A1-B VMC8D11 VMC3G7-A1-A VVIP04 VVIP04 VVIP04 VMC6G8 VMC3G7 VMC6G8 VMCNG2H2.2 VVIQ67 UDV075 VMC3G7-A1-B VVIQ67 UDV075 VMC1A12 VMCNG2H2.2 VMC1A12 VMC6G8 VMC6G8 UDV125 VMC2F12 VMC2F12 VVIP04 VMC1A12 VMC2F12 VMC1F10 VVIP75 VMC1A12 VVIP75 UDV075 VMC9F4-A1-C VVIV04 VVIV04 VMC6G8 VVIQ67 VMC2F12 VVIP75 VVIP75 VMC1F10 VVIV04 VMC1F10 VVIN56 VVIV04 VMC2F12 VVIN56 VMC1F10 VVIN56 VVIN56 VMC1F10 VMC9F4-A1-C

  5. CG10-fw JM10-r2 CG10-co JM10-r3 CG10(or) CG09-fw JM09-r2 CG09-co JM09-r3 CG09(or) VMC6E4 UDV016-DG-B UDV016-DG-B VMC6E4 VVIV37 VVIP09 VMC2E11 UDV063 VVIP38 UDV063 VMC4A1 VVIV37 VMC8A4 UDV107 VVIP09 VMC2E11 UDV059 VVIQ52 VMC8A4 VVIV37 VMC6E4 UDV016-DG-B UDV016-DG-B VVIP09 VMC2E11 VVIN78 VMC3E11.2 UDV063 UDV107 VVAK UDV063 VVIQ52 VMC8A4 VMC3H5 VMC2E11 VMC3E11.2 VVIP38 VMC2E11 VMC8A4 VVIV37 VMC3E11.2 VMC2D9 VMC3E11.2 UDV107 UDV063 VMC4A1 VMC6E4 VMC8D3 UDV059 VMC4A5 VVIP38 VMC8D3 VVIQ52 VMC4A1 VVAK VVIP09 VMC4A5-A1-A VMC3H5 VMC8D3 VMC4A1 VVAK VMC3H5 VVIP38 VVIN78 VVIN78 VMC4A5-A1-C VMC8D3 VVIQ52 VVIN78 VVIH02-A1-B VMC3H5 UDV059 VVAK VMC4A5-A1-B VMC2D9 VVIH02-A1-B UDV059 VMC9F4-A1-D UDV107 VMC2A10 VMC3E11.2 VMC9F4-A1-E VMC9F4-A1-D VMC2A10 VMC2D9 VVIQ52 VVIN85 VMC8D3 VMC4A5 VVIH02-A1-D VMC2D9 VVIN85 VMC9F4-A1-E VMC2D9 VRZAG25 VVIN85 VVIQ66 VMC9F4-A1-E VRZAG25 VMC4A5 VVIR21 VMC4A5 UDV101 VMC2A10 VVIH02-A1-B VMC4A5-A1-C VVIN85 UDV101 VMC4A5-A1-C VMC4A5-A1-C VVIN85 VVIR21 VRZAG25 VMC9F4-A1-D VMC4A5-A1-B VMC2A10 VVIR21 VMC4A5-A1-A VMC4A5-A1-A VMC2A10 VRZAG64 VVIR21 VMC9F4 VMC4A5 VRZAG64 VMC4A5-A1-B VMC4A5-A1-B VRZAG25 VMC4H6 VMC4F9.1 UDV101 VRZAG25 VMC2E2 VMC4A5-A1-A VMC4F9.1 VVIH02-A1-D VMC4H6 UDV073 VRZAG67 VMC4H6 VVIH02-A1-D UDV073 VRZAG67 VVIQ66 VVIH02-A1-B VRZAG67 VRZAG67 VMC-RegnerV1 VMC2E2 VVIQ66 VMC4F9.1 VMC4H6 VMC9F4-A1-D VMC4F9.1 VMC4F9.1 VMC4H6 VMC5C1 VMC-RegnerV1 VMC9F4 VMC9F4-A1-E UDV073 VMC2E2 UDV101 VMC2E2 VVIH02-A1-D VRZAG64 VMC5C1 VRZAG64 VMC5C1 UDV073 VVIQ66 VVIH01 VVIH01 VVIH01 UDV132 UDV073 VVIU37 VMC5C1 VMC3D7 VMC6D12 UDV132 VMC2E2 VMC3D7 VMC3D7 VMC3G8.2 VMC3G8.2 VMC9F4 VMC6D12 VVIO52 VMC3G8.2 VVIO52 VMC3G8.2 VVIU37 VVIO52 VVIU37 VVIO52 VVIH01 VVIH01 VMC6D12 UDV132 VMC3G8.2 VMC6D12 VMC3D7 VMC3D7 UDV132 VMC1C10 VMC6D12 VMC1C10 VMC1C10 VMC1C10 VMC1C10

  6. CG11-fw JM11-r2 CG11-co JM11-r3 CG11(or) CG12-fw JM12-r2 CG12-co JM12-r3 CG12(or) TT251F02 VVMD8 VVIP36.1 VVIP36.2 TT251F02 TT251F02 VVIP36.1 VVIP36.1 VVIP36.2 VMC8G6 VVIP36.2 VVIP36.1 TT251F02 TT251F02 VMC4A9 A005 VVMD8 VVMD8 VMC8G6 VMC2H4 UDV048 VMC8G6 VVIV35 VMC8G6 C004 C004 VVIV35 C004 VMC8G6 A005 A005 VMC3B8 VVMD8 VMC3B8 VMC3B8 VVIP02 VVIP02 VVIV35 VVIV35 VVIP36.1 VMC6A8 VMC5C6 VMC6A8 VVIP02 VMC4A9 VVIP02 VVIP36.2 VMC6A8 VMC5C6 VMC5C6 VMC2H4 A005 VMC2H4 VMCNG2D11-DG-A VMC2H4 C004 UDV048 VMC4A9 SCU05 VMC4A9 VMC3B8 UDV100 UDV100 SCU05 VVIV35 UDV024 SCU05 VMC6G1 UDV017 VMC5C6 VMC6G1 VVIP02 VMC1G3.2 VMCNG2D11 VMC2H4 VMCNG2D11-DG-A UDV100 VMC6G1 UDV100 VMC6G1 VMC6A8 VMC6G1 VVIT65-D VMCNG2D11-DG-B VMC1G3.2 UDV017 VMCNG2D11-DG-A VVIB19 VVIM11 VMC1G3.2 VMCNG2D11-DG-B SCU05 UDV100 VVIT65-D VMCNG2D11-DG-B VVIM11 UDV024 UDV017 VMCNG2D11 VVIM11 VVIT65-D VMCNG2D11-DG-B VVS2 VVIB32 VMC4H9 VVIB19 VMCNG2D11 VVIB19 VMC1G3.2 AAT VMC4H9 VVIB32 VVIB19 VVIB19 VVIB32 SCU05 VVIM11 VMC6C3 VMCNG2H7 VVIV05-A2-A VMC4H9 VVIB32 VVMD25 VMC4C10-DG-B VMCNG2H7 VMCNG2H7 VMC1G3.2 VMC4H9 SCU08 VMC4F3.1 VMC4F3.1 VMC4C10-DG-B VMCNG2D11 VMC3G11-DG-C VMC7F1 VMCNG2H7-DG-A VVS2 VVS2 VMC4F3.1 VVIT65-D VMC4H9 VMC2A12 VMC4C10-DG-A VMCNG2H7-DG-A VVS2 VVS2 VMC6C3 VMC6C3 VMCNG2H7-DG-A VMCNG2H7 VMC3E12 VMC7F1 VVIV05-A1-A VMC3G11-DG-C VMC3G11-DG-C VMC6C3 VMC4C10-DG-A VMC6C3 VMC7F1 VMCNG2H1 VVIV05 VVIV05 VVMD25 AAT AAT VMC7F1 VVMD25 VMC4F3.1 VVIM04 VMC4F3.1 VVIV05-A2-A VMC4C10-DG-A VVMD25 AAT VVMD25 VVIV05 VMC4C10-DG-A VMC4C10-DG-B UDV058 SCU08 SCU08 SCU08 VVIV05-A2-A VMC3G11-DG-C VMCNG2H7-DG-A VVIB10-DG-A VMC4C10-DG-C VVIV05 VMC3G11-DG-C UDV058 VMC2A12 VMC2A12 VMC4C10-DG-B VVIB10-DG-B VVIB10-DG-A VVIB10-DG-A VMC3E12 VMC3E12 VVIV05-A2-A VMC4C10-DG-C VVIB10-DG-B VVIB10-DG-B VMC2A12 VVIM04 VVIM04 VVIV05 VMC2A12 VMC8G9 VVIV05-A1-A UDV058 VMC4C10-DG-C VMCNG2H1 VMCNG2H1 VVIV05-A1-A VMC3E12 VMC8G9 VMC8G9 VMC3E12 VVIV05-A1-A VMC4C10-DG-C VMCNG2H7-DG-C VMCNG2H1 VMCNG2H1 VMC8G9 VVIB10-DG-A VVIM04 VMCNG2H7-DG-C VVIB10-DG-B VMCNG2H7-DG-C UDV058 VMC8G9 VMCNG2H7-DG-C

  7. CG13-fw JM13-r2 CG13-co JM13-r3 CG13(or) CG14-fw JM14-r2 CG14-co JM14-r3 CG14(or) GT183H07 VMCNG1E1 VMCNG1E1 VVC62 GT183H07 VMCNG1E1 VMC8H10-A1-B VVC62 VMC8H10 VMC8H10 VVIP05 VVIN62 VMC8H10-A1-B VMC8H10 VMCNG1E1 VMCNG1E1 VMC8H10 GT183H07 VMC8H10-A1-B GT183H07 VVC62 VVIN62 VVC62 VVIP05 VMC8H10-A1-B VMC3G11-DG-B VMC9C1 VMC9C1 VMC9C1 VMC8H10-A1-B VMC9C1 UDV050 UDV057 GT183H07 UDV050 UDV088 VVIN62 VVIN62 UDV057 UDV050 VVIN62 UDV057 VVIH54 VVIQ32 VMC9C1 VVIM63 VVIM63 VVIH54 VVIQ32 VVIQ32 VMC1E12 VVIH54 UDV050 VMC1E12 VVIH54 VMC1E12 VMC3G11-DG-B VVIQ32 VMC1E12 VVIM63 UDV057 VMC3G11-DG-B VMC2H12 VVIM01 SK VMC1E12 UDV088 UDV014 UDV088 VMC2H12 UDV014 VVIH54 VMC2H12 VVS1-DG-A VVIM01 SK VVIV61-A1-B VVC34 SK VMC2H12 VVIM01 UDV135 VVIM63 VVC34 VVIP22 VMC2H12 SK UDV135 VVIV61-A1-B VVIP22 VVIC51 VMC2C3 VVIM01 VMC3G11-DG-B VVC34 VVC34 UDV129 VVIC51 VMC2C3 VVIP22 VVS1-DG-A VMC2B11 UDV135 VVIP22 VVIP22 VMC3D12 VMC3D12 VMC2B11 VMC2C3 UDV135 VMC2H5 VVIC51 VVIM01 VMC2C3 VMC2C3 VVIC51 VVS1-DG-A UDV129 VMC2B11 VMC2H5 VRZAG112 VVIV61-A1-B VMC2B11 VMC2B11 VMC3D12 VVIV61-A1-B UDV038 VMC3D12 VRZAG112 VMC2H5 VMC6C10 VVIC51 VMC2H5 VMC2H5 UDV038 VVIV61 VMC6C10 VVIV61 UDV033 VMC3D12 VRZAG112 VVIV61 UDV129 VRZAG112 UDV033 VVIV61 UDV038 VMC5B3 UDV038 VRZAG112 VMC6C10 UDV124 VMC5G11 VMC6C10 VMC5B3 UDV124 VVIV69 VMC5G11 VVIV61 VMC6C10 UDV033 VMC5G11 VMC2F10-D-B VMC5G11-DG-B VMC2A5 VMC2A5 UDV129 VMC5B3 VMC2F10-D-B UDV124 VVIV69 VMC5G11 VVMD24 VMC5G11 VVIV69 UDV033 VMC5B3 VMC5G11-DG-B VMC5G11-DG-B VVMD24 VMC2F10-D-B VMCNG2B7.2-R1-A VMC2F10-D-B VMC2A5 VMC5B3 VMC9H4.2 VMCNG2B7.2-R1-A UDV020 VMCNG2B7.2-R1-B UDV020 VMC5G11-DG-B VMC9H4.2 VVMD24 VMC2A5 VMC2A9-DG UDV095 VMC2A9-DG VMC2A5 A27E VMC9H4.2 VMC2A9-DG VMCNG2B7.2-R1-B UDV020 VMC9H4.2 A27E VVIV69 VMCNG4E10.1 VVMD24 UDV095 VMC2A9-DG VMC9H4.2 VMCNG2B7.2-R1-A VMCNG4E10.1 VVIS70 VMCNG4E10.1 VVMD24 VMC6E1 UDV020 VMCNG4E10.1 A27E VMC3D8 A010 VMC3D8 VVIP26 VMC3D8 VMCNG2B7.2-R1-A VMC6E1 VMC2C7-A1-A VMCNG2B7.2-R1-B VMC2C7-A1-A VMCNG1G1.1 VMC3D8 VMC2C7-A1-A VMCNG2B7.2-R1-B UDV095 A010 VMC2C7 VVIN64 VMC2C7-A1-B VVIS70 VMC2C7-A1-A VMC2C7 VMC2C7 A010 VVIP26 VVIN64 VMC2C7-A1-B VMC2C7 VVIP26 VMC2C7 A010 VVMD29 VMC2C7-A1-B VVIN64 VVIS70 VVMD29 VMC6E1 VVIP10 VVIN64 VMC2C7-A1-B VVIP10 A27E A010 VVIP10 VVIS70 VVII51 VMC8E6 VMCNG1G1 VVMD29 VMC8E6 VVIS70 VVII51 VMC8E6 VVMD29 VMCNG1G1.1 VVII51 VVIP26 UDV095 VMC5G11-DG-A VVIP10 VMC3B12 VMC3B12 VVIN94 VVIN94 VMC6E1 VVIP26 VVIN94 VMCNG1D12 VMC5G11-DG-A VMC5G11-DG-A VMCNG1G1.1 VMC6E1 VMC8E6 VVIN70 VVIP10 VVIN70 VVIN70 VMCNG1D12 VMCNG1G1.1 VMC3B12 VMCNG1D12 VVIN94 VVIN94 VMC8E6 VVII51 VVIN70 VMC5G11-DG-A VVIN70 VMCNG1D12

  8. CG16(or) CG16-fw JM16-r2 CG16-co JM16-r3 CG15-fw JM15-r2 CG15-co CG15(or) VVIN52 UDV013 UDV032 UDV086-DG-B VMC8G3.2 UDV086-DG-D VMC4D9.2 VVIN52 VMC4D9.2 UDV016-DG-A VVMD30 VVIN52 VMC4D9.2 VVIV24 UDV104 VVIM42.1 UDV013 VVMD30 VMC8G3.2 VVIV24 UDV009 VVIM42.2 UDV032 VVIN52 VVIM42.2 VMC4D9.2 UDV013 VVIT65-DG VVIV24 UDV086-DG-B UDV013 VVIM42.1 VVIM42.1 VMCNG2H7-DG-B VMC5G8 VVIM42a UDV104 UDV086-DG-D UDV032 VVMD30 VMC3G11-DG-A VMC5G8 VMC5G8 UDV009 UDV086-DG-D VVIN52 VVIM42.2 VMC1E11 UDV016-DG-A VMC3G11-DG-A UDV009 VVIV24 UDV013 VVIV17 UDV104 VMC1E11 UDV016-DG-A VMC5G8 UDV032 GB007D01 VVIT65-DG UDV104 VVIP33 UDV086-DG-B UDV052 VMCNG2H7-DG-B VVIP33 VVIT65-DG VVIQ61 UDV009 VVIP33 UDV052 VMC1E11 VMCNG2H7-DG-B UDV104 VVIB63 VVIP33 VMC3G11-DG-A VMC1E11 VVIQ61 UDV047 UDV016-DG-A VVIV17 VMC3G11-DG-A VVIB63 VVIV67 UDV086-DG-D VVIQ61 VVIQ61 GB007D01 VVIV17 VVIV67 VVIV67 UDV116 VVIT65-DG VVIV67 UDV052 GB007D01 VVS16 VVIB63 VVS16 VMCNG2H7-DG-B VVS16 UDV052 UDV116 VMC3G11-DG-A UDV047 UDV047 VMC1E11 UDV116 VVS16 VVMD37 GB007D01 VVMD37 UDV052 VVMD37 VVIV17 VMC5F5-DG-A VVMD37 VVMD37-A1-A VMC5F5-DG-A VVMD37-A1-B VVMD37-A1-B VVMD37-A1-A VMC5F5-DG-A VVMD5 VMC5F5-DG-A VVMD37-A1-B VMC5F5-DG-B VVMD37-A1-B VVMD37-A1-A VMC5F5-DG-B VMC5F5-DG-B VVMD5 VVMD5 VVMD5 VMC5A1 VMC5A1 VVMD5 SCU14 VMC5A1 VMC4B7.2 VMC4B7.2 VMC5A1 SCU14 VMC5A1 SCU14 VMC4B7.2 VMC4B7.2 SCU14 For this linkage group, Joinmap maps were identical after rounds 2 and 3

  9. CG18-fw JM18-r2 CG18-co JM18-r3 CG18(or) CG17-fw JM17-r2 CG17-co JM17-r3 CG17(or) SCC8 VMC7F2 B004 SCC8 UDV108 VMC3C11.1 VMC7F2 A105 VMC3C11.1 SCU06 VMC6F11-A1-A VMC3C11.1 VMC3C11.1 VMC2H3 VMC6F11 SCU06 SCU06 VVIS63 VMC6F11 VVIN16 VMC3C11.1 VMC2H3 VVIS63 VVIP47.2 VMC6F11-A1-C SCU06 VVIS63 VMC2H3 VMC6F11-A1-B VMC7F2 VMC2H3 VVIQ22.2 VVIP47.2 VMC7F2 SCC8 VVIP47.2 VVMD17 VVIQ22.1 VVIQ22.2 SCC8 VVIQ22.2 VVMD17 B004 VVIQ22.2 VVIS63 VMCNG2F12 VMC3A9 SCC8 B004 VVIQ22.1 VVIQ22.1 A105 VVIQ22.1 VMC3A9 VMC7F2 A105 VMC3A9 VMC6F11-A1-A VVIQ22.2 VMC3A9 B004 UDV108 UDV108 VMC3A9 VVIN73 VVIN73 A105 VVIN73 VVIN73 ADH1 VMC6F11-A1-A VMC6F11 VVIN73 VMC6F11-A1-A UDV134 VEST401 VVIN16 VVIN16 VEST401 VMC6F11-A1-B VVIP08 VMC6F11-A1-C VMC9G4 VVIP08 VMC6F11-A1-C VVIB31-DG-B ADH3 VMCNG2F12 VMC6F11-A1-B VVC82 VMC6F11 VEST401 VMC2A7 VVIU04 VVMD17 VVMD17 VVIB09 VVC82 UDV108 UDV117 VMCNG2F12 UDV103 VVC82 VMC9G4 VVIN16 VMC2A7 UDV134 VVIV08 VMC9G4 VVC82 UDV103 VMC6F11-A1-C UDV117 UDV117 VVIP16 VMC9G4 VVIP16 VMC9G4 VVIB09 VMCNG2F12 VVIP08 VMC2A7 VMC7F6 VVIB09 VVIB09 VVIP16 VVMD17 VVIB09 VVIU04 VVIN83 VVIP08 VVIP44 VVIV08 UDV103 VMC7F6 ADH1 ADH3 VVIM10 VVIU04 VMC7F6 VVIP16 VVIV08 VVIP08 ADH1 ADH3 VVIP44 GPI GPI VMC7F6 VEST401 UDV134 GPI ADH1 VVIV08 VVIP44 ADH3 VVIN83 GPI VMC8F4.2 VVIP44 VMC8F4.2 VVIU04 VVIM10 VVIN83 VVIP44 UDV117 VMC8F4.2 VVIM10 VMC2A7 VMC8F4.2 GPI VVIN83 VVIM93 VVIM93 VVIM10 VVIM93 VMC8F4.2 VVIM93 VVIM93 VVIM72 VVIM72 VVIM72 VVIM72 VVIM72 VMCNG1B9 VMCNG1B9 VMCNG1B9 SCU10 VMCNG1B9 SCU10 SCU10 VMCNG1B9 VVIN68 VVIN68 VVIN68 VMC8H10-A1-A SCU10 VMC8H10-A1-A VMC8H10-A1-A VMC2B1.1 VVIN68 VVIV16 VVIV16 VVIV16 VMC8H10-A1-A VVIV16 VMC8B5 VMC8B5 VMC8B5 VMC2B1.1 VMC8B5 VVIB31-DG-A VVIB31-DG-A VVIB31-DG-A VVIV16 C011 C011 C011 VVIB31-DG-A VMC2A3 VMC2A3 VMC2A3 VMC8B5 VMC3E5 VMC3E5 VMC3E5 VMC2A3 VVIN03 VMC2A3 VVIN03 VVIN03 VMC3E5 VMC3E5 C011 VVIB31-DG-B VVIB31-DG-B VVIN03 VVIN03 VVIB31-DG-B VVIB31-DG-B

  10. CG19-fw JM19-r2 CG19-co JM19-r3 CG19(or) VMC7B1 VMC5A10 UDV062 VMC7B1 VMC5A10 VMC5A10 VVIP34 UDV001 UDV127 UDV062 VVIP34 UDV127 VMC7B1 UDV062 UDV062 VVIV33 UDV062 UDV127 UDV127 UDV001 UDV001 UDV001 VMC6C7 VVIP34 VVIP34 VVIP34 UDV127 VVIV33 VVIV33 VVIV33 VVIV33 UDV029 VVIM03 VVIV70 VMC6C7 B003 UDV029 UDV029 VVIV70 VVIV70 VVIM03 VVIV70 UDV029 VVIP31 VVIM03 VVIV70 VMC3B7.2 VMC5A10 VVIN04 VMC3B7.2 B003 B003 VMC3B7.2 B003 VVIP31 VVIP31 VVIP31 VVIP31 VMC3B7.2 VVIN04 VVIN04 VVIN04 VMC3B7.2 VMC5D11 VMC5D11 VMC5D11 VMC5D11 VVIP11 VVIP11 VVIP11 VVIP11 VMC5E9 VMC5D11 VMC5E9 VMC5E9 VMC5E9 VVIP11 UDV023 VMC5E9 VVIU09 UDV023 UDV023 VMC5H11 UDV023 VVIU09 VMC9A2.1 VVIU09 VMC5H11 VVIN74 VMC5H11 UDV023 VMC9A2.1 VVIU09 VVIP17.1 VMC9A2.1 VVIP17.1 VMC5H11 VVIP17.1 VMC9A2.1 VVIN74 VVIN74 VMC5H11 VVIP17.1 VMC9A2.1 VVIN74 VVIN74

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