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GMOD Administrivia

GMOD Administrivia. Scott Cain, GMOD Cooridinator. What I do. I wear many hats: Project coordinator Software developer Documentation writer Web monkey Email list admin Help desk (ie, answering support requests). What I “should” be doing. Project coordinator Software developer

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GMOD Administrivia

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  1. GMOD Administrivia Scott Cain, GMOD Cooridinator NESCent

  2. What I do I wear many hats: • Project coordinator • Software developer • Documentation writer • Web monkey • Email list admin • Help desk (ie, answering support requests) NESCent

  3. What I “should” be doing • Project coordinator • Software developer • Documentation writer NESCent

  4. How things work now • Most software is stand alone • GMOD core apps interact directly with Chado • New software • “Would this be good?” • No real formal vetting process • Ideally, require interoperability with Chado • New schema modules • Discuss on gmod-schema mailing list • Again, no vetting NESCent

  5. Current applications • Primary focus--genome feature vis & editing • Comparative genomics/mapping • General web browsing • Literature curation • Gene expression NESCent

  6. Who uses GMOD tools • Over 150 orgs (using core apps) • Using Chado: • FlyBase • BDGP • DictyBase • ParameciumDB • SGD-Princeton NESCent

  7. Future developments • Improved installation procedures • EST clustering tools (including anything that needs to go into Chado). • Phenotype and phylogeny schema modules NESCent

  8. Outreach(How to attract users) • Presenting at meetings • Buy-in from funding agencies • Mailing list announcements • From the GMOD side, having good documentation and support NESCent

  9. Attracting Evolutionary Biologists • Have a GMOD meeting here? • Presenting at what meetings? • What schema modules and apps do we need? NESCent

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