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Understanding Metabolism and Energy Transformation

Discover the fascinating world of metabolism, the chemical processes that manage a cell's resources through catabolic and anabolic pathways. Learn about energy forms, laws of thermodynamics, and the vital role of enzymes in biological reactions.

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Understanding Metabolism and Energy Transformation

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  1. Chapter 8: An Introduction To Metabolism

  2. Metabolism • The totality of an organism’s chemical processes. • Concerned with managing the material and energy resources of the cell.

  3. Catabolic Pathways • Pathways that break down complex molecules into smaller ones, releasing energy. • Example: Respiration

  4. Anabolic Pathways • Pathways that consume energy, building complex molecules from smaller ones. • Example: Photosynthesis

  5. Energy • Ability to do work. • The ability to rearrange a collection of matter. • Forms of energy: • Kinetic • Potential • Activation

  6. Kinetic Energy • Energy of action or motion.

  7. Potential Energy • Stored energy or the capacity to do work.

  8. Activation Energy • Energy needed to convert potential energy into kinetic energy. Activation Energy Potential Energy

  9. Energy Transformation • Governed by the Laws of Thermodynamics.

  10. 1st Law of Thermodynamics • Energy can be transferred and transformed, but it cannot be created or destroyed. • Also known as the law of Conservation of Energy.

  11. 2nd Law of Thermodynamics • Each energy transfer or transformation increases the entropy of the universe.

  12. Entropy • Measure of disorder.

  13. Summary • The quantity of energy in the universe is constant, but its quality is not.

  14. Question? • How does Life go against Entropy? • By using energy from the environment or external sources (e.g. food, light).

  15. Free Energy • The portion of a system's energy that can perform work.

  16. Free Energy G = H - TS G = free energy of a system H = total energy of a system T = temperature in oK S = entropy of a system

  17. Free Energy of a System • If the system has: • more free energy • it is less stable • It has greater work capacity

  18. Free Energy Changes

  19. Spontaneous Process • If the system is unstable, it has a greater tendency to change spontaneously to a more stable state. • This change provides free energy for work.

  20. Chemical Reactions • Are the source of energy for living systems. • Are based on free energy changes.

  21. Reaction Types • Exergonic: chemical reactions with a net release of free energy. • Endergonic: chemical reactions that absorb free energy from the surroundings.

  22. Exergonic/Endergonic

  23. Biological Examples • Exergonic - respiration • Endergonic - photosynthesis

  24. Cell - Types of Work • Mechanical - muscle contractions • Transport - pumping across membranes • Chemical - making polymers

  25. Cell Energy • Couples an exergonic process to drive an endergonic one. • ATP is used to couple the reactions together.

  26. ATP • Adenosine Triphosphate • Made of: - Adenine (nitrogenous base) - Ribose (pentose sugar) - 3 phosphate groups

  27. Adenine Phosphates Ribose

  28. Key to ATP • Is in the three phosphate groups. • Negative charges repel each other and makes the phosphates unstable.

  29. ATP • Works by energizing other molecules by transferring phosphate groups.

  30. ATP vs Food • ATP: • Renewable energy resource. • Unstable bonds • Food: • Long term energy storage • Stable bonds

  31. ATP Cycles • Energy released from ATP drives anabolic reactions. • Energy from catabolic reactions “recharges” ATP.

  32. ATP Cycle

  33. ATP in Cells • A cell's ATP content is recycled every minute. • Humans use close to their body weight in ATP daily. • No ATP production equals quick death.

  34. Enzymes • Biological catalysts made of protein. • Cause the rate of a chemical reaction to increase.

  35. Chemical Reaction AB + CD AC + BD AB and CD are “reactants” AC and BD are “products”

  36. Enzymes • Lower the activation energy for a chemical reaction to take place.

  37. Enzyme Terms • Substrate - the material and enzyme works on. • Enzyme names: Ex. Sucrase - ase name of an enzyme 1st part tells what the substrate is. (Sucrose)

  38. Enzyme Name • Some older known enzymes don't fit this naming pattern. • Examples: pepsin, trypsin

  39. Active Site • The area of an enzyme that binds to the substrate. • Structure is designed to fit the molecular shape of the substrate. • Therefore, each enzyme is substrate specific.

  40. Models of How Enzymes Work 1. Lock and Key model 2. Induced Fit model

  41. Lock and Key Model • Substrate (key) fits to the active site (lock) which provides a microenvironment for the specific reaction.

  42. Induced Fit Model • Substrate “almost” fits into the active site, causing a strain on the chemical bonds, allowing the reaction.

  43. Substrate Active Site

  44. Enzymes • Usually specific to one substrate. • Each chemical reaction in a cell requires its own enzyme.

  45. Factors that Affect Enzymes • Environment • Cofactors • Coenzymes • Inhibitors • Allosteric Sites

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