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Bobby Hodges, Elizabeth Ross, Natalie Simak , Keith Solvang and Eliot Vildaver. Lung Cancer: The Breathtaking Battle of TKIs and EGFR Mutants. Diseased Genome Hospital. http:// blogs.usask.ca/medical_education/archive/ElksRehabFront%2520Door.jpg.
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Bobby Hodges, Elizabeth Ross, Natalie Simak, Keith Solvang and Eliot Vildaver Lung Cancer: The Breathtaking Battle of TKIs and EGFR Mutants
Diseased Genome Hospital http://blogs.usask.ca/medical_education/archive/ElksRehabFront%2520Door.jpg
http://1.bp.blogspot.com/_HI2mCx5P3H0/SLlEQoHj8AI/AAAAAAAAA8Q/My7tf78TNc8/s320/hospital-bed-786282.jpghttp://1.bp.blogspot.com/_HI2mCx5P3H0/SLlEQoHj8AI/AAAAAAAAA8Q/My7tf78TNc8/s320/hospital-bed-786282.jpg
http://www.cardiothoracicsurgery.org/content/2/1/16/figure/F1?highres=yhttp://www.cardiothoracicsurgery.org/content/2/1/16/figure/F1?highres=y
Where Are We Headed? http://www.freefoto.com/images/21/16/21_16_2---Single-Carriageway-Road_web.jpg
Cancer http://www.odec.ca/projects/2005/thog5n0/public_html/Tumour.gif
History of Lung Cancer http://www.icowman.com/uploadfiles/2007072409225175.jpg http://www.icowman.com/uploadfiles/2007072409225175.jpg
Pathology Non Small Cell Small Cell Bronchi Grows rapidly Spreads quickly • Squamous cell carcinoma • Adenocarcinoma • Large-cell carcinoma http://images.google.com/imgres?imgurl=http://upload.wikimedia.org/ Lynch et al., (2004) http://images.google.com/imgres?imgurl=http://www.dkimages.com/discover/previews/852/20223038.JPG
Risk Factors http://www.taconichills.k12.ny.us/webquests/noncomdisease/lungcancerpic.jpg
You Are Not Alone • This year approximately 200,000 people will be diagnosed with lung cancer • NSCLC accounts for 80% of all lung cancers http://www.cdc.gov/cancer/lung/statistics/ http://seo2.0.onreact.com/wp-content/uploads/2008/09/you-re-not-alone.jpg
Epidemiology http://medicineworld.org/cancer/lung/ http://images.google.com/
What Next? While there is no known cure as of right now, there ARE options! Imatinib Gefinitib Cisplatin http://dspace.mit.edu http://dspace.mit.edu
EGF ERBB2 Cisplatin Imatinib Protein Cascade Gefitinib EGFR P ? Nucleus ?
P VEGF-A EGF MET P ERBB2 P PI3K Imatinib Cisplatin Gefitinib Protein Cascade Protein Cascade EGFR P AKT PDGFR P Nucleus
Implications of Chromosomal Loci in the Development of Lung Cancer http://academic.evergreen.edu http://rosenblumtv.files.wordpress.com http://www.pharmgkb.org
Chromosomes • Compact structures of DNA • Contains thousands of genes Chromatid Centromere Genes http://staff.jccc.net/PDECELL/celldivision/chromosome1.gif
Single Nucleotide Polymorphisms (SNPs) • Single variation in nucleotide base pairs • Alleles are a result of SNPs within gene sequence • SNP’s are the basis for lung cancer susceptibility http://www.dnalandmarks.com/english/pictures/what_are_snps.jpg
Genome-wide Association Studies • Variation across genomes • Genotype cases along with controls • Find roles that genes play in disease • Large sample sizes http://www.blog.speculist.com/archives/dna2two
Identifying Regions On Chromosomes 6 Regions Away p-arm Centromere Region 5q6 q-arm 5 http://images.google.com/
Three Regions of Association http://upload.wikimedia.org/ http://upload.wikimedia.org/
Nicotinic Acetylcholine Receptor Genes Found on 15q24 and 15q25 http://www.jyi.org/articleimages/88/originals/img0.jpg Nicotine binds and stimulates acetylcholine ion channel-linked in neurons
How were these regions discovered? (Hung et al., 2008)
15q24 highly linked with smoking behavior (Thorgeirson et al., 2008)
TERT gene found on 5p15.33 Cancerous Growth http://images.google.com/i
5p15.33 shows similar results (McKay et al., 2008)
P VEGF-A EGF MET P ERBB2 P PI3K Imatinib Cisplatin Gefitinib Protein Cascade Protein Cascade EGFR P AKT PDGFR P Nucleus
EGFR/ERBB2 Forms a Heterodimer EGFR EGFR EGF EGFR ERBB2 ERBB2 P P Proliferation Protein Cascade Survival Nucleus Apoptosis
Mutated EGFR Leads to Cancer ERBB2 EGFR P Protein Cascade Proliferation Nucleus
Mutated EGFRs have Distinct Patterns of Tyr Phosphorylation (Chen et al., 2006)
Tyrosine Kinase Inhibitors (TKIs)Gefitinib EGFR Tyrosine Kinase domain ATP TKI ATP binding cleft on the kinase
Gefitinib Suppresses Phosphorylation of Most EGFR Mutants (Chen et al., 2006)
Effectiveness of Gefitinib is Dependent on Concentration (Pedersen et al., 2005)
High Doses of Gefitinib Decreases Proliferation of Mutated EGFR Cells (Pedersen et al., 2005)
Gefitinib has Variable Growth-Inhibitory Effects (Chen et al., 2006)
P VEGF-A EGF MET P ERBB2 P PI3K Imatinib Cisplatin Gefitinib Protein Cascade Protein Cascade EGFR P AKT PDGFR P Nucleus
What Are the Roles of Proteins Associated with Lung Cancer? http://www.taconichills.k12.ny.us/webquests/noncomdisease/lungcancerpic.jpg
Recap Alanine N-terminus Tyrosine P P C-terminus P Nucleus Threonine Leucine Serine Lysine
Domain Attraction ERBB2 P P PI3K Protein Cascade SH2 Change in Gene Expression Nucleus
Main Contributors to NSCLC (Rikova et al. 2007)
Link between Concentration and Interaction (Jones et al. 2006) Green andBlue circles = Proteins involved in cascade Interactions Red lines = Red circles = EGFR Receptor
Other ERBB2 Associations No. protein receptors No. protein receptors No. protein receptors Affinity Threshold (nM) Affinity Threshold (nM) Affinity Threshold (nM) (Jones et al. 2006)
Are there other types of Proteins? http://en.wikipedia.org/wiki/Proteins
Other Contributors to NSCLC (Rikova et al. 2007)
Specifically, some proteins more than others Amount of overphosphorylated protein in samples Chart configured from Table1 of Rikova et al. 2007