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Exporting data for EFABIS. ERFP Workshop 30 April – 2 May 2009 Reykjavik, Iceland.
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Exporting data for EFABIS ERFP Workshop30 April – 2 May 2009Reykjavik, Iceland Action EFABISnet AGRI GEN RES 020 receives financial support from the European Commission, Genetic Resources in Agriculture, under European Commission Council Regulation (EC) No 870/2004 AGRI GEN RES 2006 EFABISnet
Outline • EFABIS system • CryoWEB • Exchange protocol • Export data from CryoWeb • Import data in EFABIS
EFABIS system • European Farm Animal Biodiversity Information System • A network of national and regional database exchanging breeds, contacts and library data • For more information see the help and FAQ on http://efabis.tzv.fal.de
Population and conservation statistics Population statistics per year are recorded for each breed The total amount of genetic material stored in genebanks are recorded for each breed
Breed totals reported CryoWeb vs FABISnet • Individual animal records • Actual from register
Exchange protocol • CryoWeb contains individual animal data • EFABIS contains cumulated yearly statistics per breed • These cumulated statistics can be generated from the data in CryoWeb • The generated statistics from other systems can be joioned and uploaded in EFABIS
Exchange protocol II The file format is defined in the protocol description The statistics from other systems can be joined at this step
Export data from CryoWeb First click on the ”Main menu” To be able to export data from CryoWeb, you should be logged as a manager
Export data from CryoWeb II First click on the ”Admins” tab Then click on the ”EFABIS export” tab This will bring you to the ”Export data for EFABIS” form
Export data from CryoWeb III Select one or more years from the list To create the export file click the link ”Export data” To select more than one year press and hold Ctrl key and select with the mouse
Export data from CryoWeb IV Click on the link to download the file
Export data from CryoWeb V Choose ”Save file” Click the ”OK” button to save the file to your computer
Export data from CryoWeb VI Semen Oocytes Year Species Somatic cells male Embryos Breed Country Somatic cells female 2006|Galloway|Cattle|Germany|434|434|0|4343|444 2006|Salers|Cattle|Germany|6|321||32131| 2006|Braunvieh alter Zuchtrichtung|Cattle|Germany||3|||23 2006|Blonde d'Aquitaine|Cattle|Germany|||32|| 2006|Deutsche Langschan|Chicken|Germany||||| 2006|Charolais|Cattle|Germany||33||| 2006|Pinzgauer Fleischnutzung|Cattle|Germany||||| Export file format
Import data in EFABIS Log-in as National Coordinator
Import data in EFABIS II Then click on ”Upload conservation data” link Click on ”Enter data” menu item
Import data in EFABIS III Click on the ”Browse” button Then choose from your computer the file exported from CryoWeb
Import data in EFABIS IV Click on the ”Upload file” button to load the data in EFABIS
Import data in EFABIS V Save the report file with the status of loading on your computer
Import data in EFABIS VI Status 2006|Galloway|Cattle|Germany|434|434|0|4343|444->OK-> 2006|Salers|Cattle|Germany|6|321||32131|->OK-> 2006|Braunvieh alter Zuchtrichtung|Cattle|Germany||3|||23->OK-> 2006|Blonde d'Aquitaine|Cattle|Germany|||32||->OK-> 2006|Deutsche Langschan|Chicken|Germany|||||->OK-> 2006|Charolais|Cattle|Germany||33|||->ERR->No population record for this year 2006|Pinzgauer Fleischnutzung|Cattle|Germany||||| Error message
ERFP meeting Reykjavík, 2009 Thank you for your attention!