1 / 1

Wadden Sea fosmid clone ws101A12, orf23

SI Fig. 2. pos. * * *. Wadden Sea fosmid clone ws101A12, orf23. 132. NWHTDGYYNG PGARVNAFVL HCVRPAAAGG ENCIIDPEIA YLRLRQENPE FIRALM--HPE---A MTIPEN. Wadden Sea fosmid clone ws85G8, orf06. 92.

bryce
Download Presentation

Wadden Sea fosmid clone ws101A12, orf23

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. SI Fig. 2 pos * * * Wadden Sea fosmid clone ws101A12, orf23 132 NWHTDGYYNG PGARVNAFVL HCVRPAAAGG ENCIIDPEIA YLRLRQENPE FIRALM--HPE---A MTIPEN Wadden Sea fosmid clone ws85G8, orf06 92 SWHTDGYYNE KNRQINAVVL HCVEAASRGG ENALLDPEMV YIKLRDEDPR FIAAFE--HPE---C MTIPAN Wadden Sea fosmid clone ws20C1, orf14 86 GWHTDGYYNA GTLQVRAWLL FCAQPAAEGG ANELFDHEVA YIRLRDENPG WIRALM--ARN---A FTIPSN Wadden Sea fosmid clone ws34A6, orf18 126 NWHTDGYYNR LDEQVCGIVM HCVSEPATGG DNLILDPEIA YILMRDENPG YIAALM--QAD---A MTIPPN Wadden Sea fosmid clone ws138B4, orf10 120 NWHTDGYYNR LDQQVRGIVM HCVSEPASGG DNLFLDPEIA YILLRDENPD YIAALM--QPD---A MTIPPN 135 SWHTDGYYNS VEQRIRGMLL HCVSDAAQGG DNLLLDHEIC YIHLRDTNPD YIHALM--QPR---A MTIPPN Wadden Sea fosmid clone ws172H5, orf20 Wadden Sea fosmid clone ws643C1, orf19 117 NWHTDGYYNR PQEQVRGIIM HCVSTSASGG DNLFLDPEIA YLLLRDENPD YIRAFM--QPD---A MTIPAN 79 NWHTDGYYNA IAAPVRAFIL HCRRPAEQGG ENSLLDPEYI YIRLRDLSVD LIAALM--EEH---A LTIPEN Wadden Sea fosmid clone ws156A7, orf14 Beggiatoa sp. PS (ZP_01998516) 128 HWHTDGYYNA LDKQIYGMIL HCVSPAQTGG ENALLDHEIA YIKLRDENPD YIHTLM--QPD---V MCIPAN Thioalkalivibrio sp. (YP_002514251) 140 SWHCDGYYNP PERRIRAMLL HCVTDAAEGG ENALLDHELL YIRLRDENPG WIEALM--HPQ---A MTIPEN 121 SWHTDGYYNS PEHQIHGLLL HCVHPAEEGG ANDLLDHEIA YILLRDLSPE FIRALM--HPE---C MTIPAN Allochromatium vinosum (YP_003444269) Magnetospirillum magneticum AMB-1 (YP_422729) 122 TWHTDGYYNP PERIVRALLL HCAGKAAEGG ANRLMDHEML YILLRDQDPE LIRVLM--QPD---A MTIPGN 122 TWHTDGYYNP PERTVRALLL HCAGRAAEGG ANRLMDHEML YIQLRDESPD MIRALM--EPD---A MTIPGN Magnetospirillum magnetotacticum MS-1 (ZP_00053118) Magnetococcus sp. MC-1 (YP_864577) 125 QWHTDGYYNE PERTIRGMAL HCARQAEQGG ENDLLDHEIM YIRLRDQNPE HIRALM--AED---V LTIPAR 121 NWHTDGYYNP PERRVRGLIL HCVRPAREGG VNRLLDHRLV WQALAVSRPD ALKALQ--HPR---A MTIPPD Alkalilimnicola ehrlichei MLHE-1 (YP_742488) 132 HWHTDGYYND PDKQIHALNL HVVQKAEKGG ENQLMDHEIA YILLREKNPD FVRALM--QNN---V MMIPAG uncultured SUP05 cluster (EEZ80625) Candidatus Ruthia magnifica (YP_904216) 116 GWHTDGYYNT IEQCIRAFSL FCITPANCGG ENQWIDQQMV YLQLRESNPD VTKALT--HTQ---A MSIPEH 44 AWHTDGYYNQ SEEQIHGLLL HCVEPAAKGG ENALLDHEIV YLQIRDYQPA YIQALM--HPQ---A MTIPAN Endoriftia persephone (ZP_02537955) Candidatus Vesicomyosocius okutanii (YP_001219765) 166 GWHTDGYYNK TDQRIRAFSL FCVTPASYGG ENKWINQQIV YLQLRESNPD VAMALT--HAQ---A MSIPEH 119 KWHTDGYYNP PERTIRGMIL HCVRNASSGG ENQLMDHELA YLLLRDEDPQ HIQALM--QPD---A MTIPER Sideroxydans litotrophicus (YP_003524312) 122 NWHTDATYYG SNHTIQALFL LCKRPALEGG SNKVLDHEVL YIHLRDKAPE ALDVLM--NRD---C FNYRNP Thiobacillus denitrificans (YP_314816) 123 NWHTDGYYNA LDRRILGMTL HCAQDAEAGG ENALLDHEIA YIQLRDTDPD YVAALM--QPD---A MTIPAR Thiobacillus denitrificans (YP_316249) 111 LWHSDSSFQQ PAA--RYSML SAVVVPPSGG DTEFCDMRAA YDALPRDLQS ELEGLRAEHYAL--N SRFLLG Ralstonia eutropha, a-ketoglutarate dioxygenase (YP_025400) 97 NWHTDVTFIE TPP--AGAIL AAKELPSTGG DTLWTSGIAA YEALSVPFRQ LLSGLRAEH-DF--R KSFPEY Escherichia coli, taurine dioxygenase (NP_414902) Supplementary Figure 2. Alignment of dsrQ derived amino acid sequences encoded on Wadden Sea fosmid clones and genomes of known SOP. Illustrated is the iron-binding motif His-X-Asp-X53-His of the taurine dioxygenase of E. coli. Conserved His and Asp residues are marked by asterisks (*). Grey shading indicates 90% sequence identity.

More Related