1 / 17

NGIC and BINAsia

NGIC and BINAsia. Jong Bhak NGIC KRIBB Korea. Acknowledgment. APCTT Biotec Participants from Asian Countries Organizing staff MOSTfor support. NGIC Chronicle. NGIC History. 2001. 04 : National Genome Information Center Proposed 2001. 07 : Detailed Establishment plan

carson
Download Presentation

NGIC and BINAsia

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. NGIC and BINAsia Jong Bhak NGIC KRIBB Korea

  2. Acknowledgment • APCTT • Biotec • Participants from Asian Countries • Organizing staff • MOSTfor support

  3. NGIC Chronicle NGIC History • 2001.04 : National Genome Information Center Proposed • 2001.07 : Detailed Establishment plan • 2001. 10 : NGIC Launched • 2003. 08 : Designated focal point for research data deposition • 2004. 01 : Initiation of BioInformation Portal Service • 2005. 03 : Data analysis system launched • 2005. 08 : National BioInformation Center Proposed • 2005. 12 : Detailed Establishment plan • 2006. 02 : (Konbic) Korea National BioInformation Center to be launched

  4. 인원 • NGIC present 연구비단위 : 백만원 약 4,000 이상 PC용 서버 20대 운영 3,754 Opteron Cluster급 2대 도입예정 3,504 PC급 서버 15대 PC급 서버 7대 Opteron Linux cluster Opteron Linux cluster Origin3400 1,997 PC급 서버 3대 약 60명 Storage Storage Storage Origin3400 55명 Sun server 41명 Sun server Sun server Sun server 33명 Xeon Linux cluster Xeon Linux cluster Xeon Linux cluster Compaq server 2005 2006 2003 2004 연구비 장비운영현황

  5. Operation network of NGIC KNIH Microbial Genomes Human Genome Frontier Large- scale Data GRID NGIC Plant Resource Frontier Proteomics Frontier Application GRID Cattle Research Centers Crop Plant Frontier Agriculture Research Centers ETRI KISTI

  6. Ome Bio Matrix Transcript Proteome Interactome Functome Textome Genome 자원 file Sequence 자원 Structure Expression 분석 분석 Pipeline Pathway Regulation Bio Resource BioEngine DB Network BioDiversity Info Type 포탈 서버 Materials Bank 2ndary DB 2ndary Info

  7. 진핵 유전체 SIGP SiRNA IEA PSIMAP …. SAGED GS2PATH Gene set Analyze Textome Comp Genome HapMap NormPipe … TF Explorer Repeatome Active Promoter SNP Stroke . . . … KUGI LoCalodom PEIORF ArrayPort PDS FESD Automatic BioInformation Pipeline Processing System Biozine BioPortal Bio Engine BioWiki Bio Journal

  8. Protein Structure Protein Interaction Chimpanzee Gene Regulation SNP Cancer Microarray Chemical Genomics Stroke SOL siRNA Biomarker • Biological DB • Bioinformatic Tool • BioPipeline • 2ndary DBs • Inhouse Bio Tool BioEngine

  9. BinAsia as I see • 1st stage: Biotechnology Introduction Network for Asia • 2nd stage: Bio Information Net for Asia • Information Infrastructure • Information experts and staff • IT hardware infra • Virtual network interfaced with web. • Regular meetings by focal nodes and focal node technicians

  10. Practicals of BinAsia • Establishment of working BioInformation Net • BioTechnology List for local nodes • Agricultural BT • Biofertilizer, BioIndicator, Bioremediation • Biopesticides Biogas • Commercialization of local knowledge • Training program in BioInformation Handling • Language issues  Inglish ?

  11. Todos • Establishing working National nodes for BinAsia • Establishing working a central information node • Integrated BioInfo DBs for local nodes • Basic information gathering by local and central node • Value-added information generation & dissemination • Analysis of Asian BT and BioInfoTech • Next meeting in Thailand? • Adjusting BINAsia funding and operation. • License issues  http://biolicense.org/

  12. Basic Info. Gathering • Traditional knowledge in BT • Statistics on BT (industry and schools) • Bit BT projects • Shrimp genome • Casava genome project • Translating local language to English

  13. Future • Asian Biotechnology Information Network  Virtual Regional Center • In workin with other Asian BioInformation Centers • AMBL • eIMBL • Counterpart to EBI • BT info. network for AU (Asian Union?)

  14. Virtual Bioinformatics Center • http://vbio.org/

  15. CJK bioinformatics Training course • 5th CJK bioinformatics training course • Expansion of Training and Teaching program • http://biomoodle.net/

  16. Proposed Role of NGIC for BINasia • NGIC collects biotechnology DBs, information servers, tools and education materials • NGIC serves a fast website for managing the above function. • NGIC mirrors binasia.net site for backup. • NGIC represents Korean node of BINasia • NGIC supports BINasia meetings and administration

  17. ASEAN and NGIC • ASEAN + Korea bioinformatics network • From year 2007, NGIC is likely to get more funding for international project such as BINAsia.

More Related