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Profiles Research Networking Software Users Group Meeting http://profiles.catalyst.harvard.edu. March 15, 2013. Agenda. Welcome to New Members Upcoming Events Profiles RNS 1.0.3. Profiles Users Group Members. Harvard Univ Minnesota Dartmouth Univ Mass Boston Univ Tufts Univ Boston VA
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Profiles Research Networking SoftwareUsers Group Meetinghttp://profiles.catalyst.harvard.edu March 15, 2013
Agenda • Welcome to New Members • Upcoming Events • Profiles RNS 1.0.3
Profiles Users Group Members Harvard Univ Minnesota Dartmouth Univ Mass Boston Univ Tufts Univ Boston VA Rensselaer Univ Connecticut Univ Rochester NYU Med Ctr Long Island University Mount Sinai Sch of Med New Jersey Med Sch MedMeme Thomas Jefferson UPenn Johns Hopkins USUHS-CNRM NIH George Wash U Penn State Childrens Nat Med Ctr Duke Cancer Institute Wake Forest Leadership in Med HSSC Georgia Tech Piedmont Healthcare Emory University UCSF Fred Hutchinson CRC Oregon Health Sci U UC Davis (CBST) Touro University U Southern California UCLA UC San Diego Charles Drew U Hawaii Arizona State Montana State U Colorado Denver U Nebraska-Lincoln UW Madison UW-Milwaukee U Illinois U Chicago Baylor College Med UT Southwestern UT Houston Midwestern State Univ Jackson State (RTRN) Ohio State Cincinnati Children’s Case Western U Kentucky Vanderbilt Stem Cell U Arkansas Little Rock U Alabama Birmingham Symplectic Limited (UK) McGill University (Canada) Finders University (Australia) University of Cambridge (UK) Elysium, Geneva (Switzerland) Makerere University (Uganda) University of Leuven (Belgium) South-Valley University (Egypt) Erasmus University (Brussels) Beijing Normal University (China) University of the South Pacific (Fiji) Velammal Engineering College (India) University of Limpopo (South Africa) Nati Sci Lib, Chinese Acad of Sci (China) Clinical & Biomedical Computing Ltd (UK) Jonkoping University Engineering School (Sweden) Universidad Nacional Autonoma de Mexico (Mexico) Ministério da Ciência e Tecnologia e Inovação (Brazil) Jaypee University of Information Technology (India) Centre Interdisciplinaire de Nanoscience de Marseille (France)
Upcoming Events • AMIA TBI/CRI, San Francisco, CA, March 18-22, 2013 • UCSF Poster: Usage of a Research Networking Tool at a large Academic Biomedical Institution • UCSF Presentation: Open Research Networking Gadgets (ORNG) • Harvard Poster: EAGER-Profiles: Using Researcher Profiles to Demonstrate the Impact of Investments in Science • Science of Team Science Conference, Evanston, IL, June 24-27, 2013 • VIVO Annual Conference, St. Louis, Missouri, August 14-16, 2013
Profiles RNS 1.0.3 • New Features • Concept Profile Page (MeSH Info, Top Journals) • Publication Profile (Subject Areas) • Performance enhancements • Jobs, .NET caching, snapshot isolation, etc. • Bug fixes • Overview editing, Pubmed disambiguation failures, etc. • Process • Managed by Recombinant by Deloitte • Still distributed from http://profiles.catalyst.harvard.edu • Source code in GitHub at https://github.com/ProfilesRNS/ProfilesRNS • What’s next? • OpenSocial from UCSF
VIVO Ontology: Select Classes and Object Properties Main classes used by Profiles RNS 1.0 are highlighted in bold. foaf:Agent vivo:mailingAddress vivo:mailingAddressFor vivo:webpage vivo:webpageOf vivo:Address vivo:URLLink foaf:Person vivo:FacultyMember vivo:authorInAuthorship vivo:linkedAuthor vivo:personInPosition vivo:positionForPerson vivo:hasResearchArea vivo:researchAreaOf vivo:hasMemberRole vivo:memberRoleOf vivo:hasTeacherRole vivo:teacherRoleOf vivo:Relationship skos:Concept vivo:Role vivo:Position vivo:Authorship vivo:TeacherRole vivo:FacultyPosition vivo:subjectAreaFor vivo:hasSubjectArea vivo:MemberRole vivo:NonAcademicPosition vivo:linkedInformationResource vivo:informationResourceInAuthorsip vivo:positionInOrganization vivo:organizationForPosition vivo:roleRealizedIn vivo:realizedRole vivo:roleRealizedIn vivo:realizedRole vivo:InformationResource bibo:Document vivo:Project event:Event foaf:Agent bibo:Article vivo:Course foaf:Organization bibo:AcademicArticle core:Department bibo:Book core:Division event = foaf = skos = vivo = http://purl.org/NET/c4dm/event.owl# http://xmlns.com/foaf/0.1/ http://www.w3.org/2008/05/skos# http://vivoweb.org/ontology/core# bibo:Patent
Profiles RNS 1.0.3 Installation Data Flow Diagram Selected data sources (circles), tables (grey boxes), and procedures (red boxes) used during the installation of Profiles RNS 1.0.3. Source Data Intermediate Processing Tables Tables Used by the Website [Ontology.Import]. [Convert OWL2Triple] [Ontology.Import]. [Owl] [Ontology.Import]. [Triple] *.OWL Files [Ontology.Import]. [Convert Triple2OWL] [Ontology.]. [UpdateCounts] _* (Derived Fields) Ontology [Ontology.]. [UpdateDerivedFields] [Framework.]. [LoadInstallData] [Ontology.].* [Framework.].* [Framework]. [InstallData] InstallData.xml [Framework.]. [CreateInstallData] [RDF.Stage]. [LoadTriples FromOntology] [RDF.Security]. [NodeProperty] [Profile.Import]. [BetaSetDisplayPreferences] [RDF].[Alias] [RDF.Stage]. [LoadAliases] [RDF.Stage]. [Triple] Profiles Beta [Profile.Import]. [Beta.LoadData] [Framework.]. [RunJobGroup] [RDF.Stage]. [ProcessTriples] Extended Schema Tables [RDF.].[Node] [RDF.].[Triple] Data [Search.Cache]. [Public.*] HR Database [RDF.Stage]. [ProcessDataMap] [Search.Cache]. [Public.UpdateCache] Custom Process to Load [Profile.Import].* Tables [Search.Cache]. [Private.*] [Search.Cache]. [Private.UpdateCache] Disambiguation Services [Profile.Data]. [Publication.PubMed. GetPersonInfoForDisambiguation] [RDF.Stage]. [InternalNodeMap] [Profile.Data]. [Concept.Mesh.File] [Utility.NLP]. [Thesaurus] SemGroups/MeSH.xml [Profile.Data]. [Concept.Mesh. ParseMeshXML] [Utility.NLP]. [UpdateThesaurus]
