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Multimodal Brain Imaging. Will Penny. Wellcome Trust Centre for Neuroimaging, University College, London. Guillaume Flandin, CEA, Paris Nelson Trujillo-Barreto, CNC, Havana. Neuronal Activity. Experimental Manipulation. Optical Imaging. MEG,EEG. PET. fMRI. FORWARD MODELS.
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Multimodal Brain Imaging Will Penny Wellcome Trust Centre for Neuroimaging, University College, London Guillaume Flandin, CEA, Paris Nelson Trujillo-Barreto, CNC, Havana
Neuronal Activity Experimental Manipulation Optical Imaging MEG,EEG PET fMRI FORWARD MODELS Single/multi-unit recordings Spatial convolution via Maxwell’s equations Sensorimotor Memory Language Emotion Social cognition Temporal convolution via Hemodynamic/Balloon models
Neuronal Activity Experimental Manipulation MEG,EEG fMRI INVERSION Spatial deconvolution via beamformers
MEG/EEG: Source reconstruction Source model ‘Imaging’ ‘ECD’ Forward model Registration Inverse method Data Anatomy
MEG/EEG: Source reconstruction Sources MEG data Source Reconstruction ‘Equivalent Current Dipoles’ (ECD) ‘Imaging’ EEG data
Neuronal Activity Experimental Manipulation MEG,EEG fMRI INVERSION Spatial deconvolution via beamformers Temporal deconvolution via model fitting/inversion
fMRI Forward Model Seconds
Effect Map Parameter Estimates fMRI model fitting Design matrix fMRI time-series Motion Correction Smoothing General Linear Model Spatial Normalisation Anatomical Reference
Neuronal Activity Experimental Manipulation MEG,EEG fMRI INVERSION 1. Spatio-temporal deconvolution Spatial deconvolution via beamformers 2. Probabilistic treatment Temporal deconvolution via model fitting/inversion
Overview • Spatio-temporal deconvolution for M/EEG • Spatio-temporal deconvolution for fMRI • Towards models for multimodal imaging
Add temporal constraints in the form of a General Linear Model to describe the temporal evolution of the signal. Puts M/EEG analysis into same framework as PET/fMRI analysis. Work with Nelson. Described in chapter of new SPM book: Friston et al. Statistical Parametric Mapping, Elsevier, London, 2006 Spatio-temporal deconvolution for M/EEG
Repeat L • Update source estimates, q(j) • Update regression coefficients, q(w) • Update spatial precisions, q(a) • Update temporal precisions, q(l) • Update sensor precisions, q() KL F Until change in F is small Approximate Bayesian Inference
700ms 500ms 2456ms 600ms Fa o + + + Time Sa + o Sb + + High Symmetry Low Symmetry Low Asymmetry High Asymmetry Phase 1 Ub Henson R. et al., Cerebral Cortex, 2005
A1 Faces minus Scrambled Faces B8 170ms post-stimulus
B8 A1 Faces Scrambled Faces
Daubechies Cubic Splines Wavelets
Daubechies-4 28 Basis Functions 30 Basis Functions
ERP Faces ERP Scrambled
Faces – Scrambled faces: Difference of absolute values t = 170 ms
Temporal evolution is described by GLM in the usual way. Add spatial constraints on regression coefficients in the form of a spatial basis set eg. spatial wavelets. Automatically select the appropriate basis subset using a mixture prior which switches off irrelevant bases. Embed this in a probabilistic model. Work with Guillaume. In Neuroimage. Spatio-temporal deconvolution for fMRI
Mixture prior on wavelet coefficients • Wavelet switches: d=1 if coefficient is ON. Occurs with probability p • If switch is on, draw z from the fat Gaussian.
Probabilistic Model for fMRI Switch priors Wavelet switches Wavelet coefficients Spatial Model General Linear Model Temporal Model fMRI data
Inversion using wavelet priors is faster than using standard EEG priors
Use simultaneous EEG- fMRI to identify relationship Between EEG and BOLD (MMN and Flicker paradigms) EEG is compromised -> artifact removal Testing the `heuristic’ Start work on specifying generative models Ongoing work with Felix Blankenburg and James Kilner Towards multimodal imaging
MRI Gradient artefact removal from EEG We have “synchronized sEEG-fMRI” – MR clock triggers both fMRI and EEG acquisition; after each trigger we get 1 slice of fMRI and 65ms worth of EEG. Synchronisation makes removal of GA artefact easier
Ballistocardiogram removal Could identify QRS complex from ECG to set up a ‘BCG window’ for subsequent processing
Testing the heuristic • The EEG-BOLD heuristic (Kilner, Mattout, Henson & Friston) contends that • increases in average EEG frequency predict BOLD activation. g(w) = spectral density
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