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CCR User Advisory Board Meeting January 2005

University at Buffalo. The State University of New York. CCR User Advisory Board Meeting January 2005. Russ Miller Center for Computational Research Computer Science & Engineering SUNY-Buffalo Hauptman-Woodward Medical Inst. Organization. Internal Advisory Committee

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CCR User Advisory Board Meeting January 2005

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  1. University at Buffalo The State University of New York CCR User Advisory Board Meeting January 2005 Russ Miller Center for Computational Research Computer Science & Engineering SUNY-Buffalo Hauptman-Woodward Medical Inst

  2. Organization • Internal Advisory Committee • Innus, Nowak, Pitman, Trevisan • Education/Outreach • Pitman, Furlani • Colloquia, Training, User Services • Patra, Furlani, Hu, Jones, King • Allocations • Coppens, Jankovic, Patra • User Advisory Board • Kofke, Bisantz, Bursik, Coppens, DesJardin, Gaile, Halfon, Han, Jain, Jankovic, Lund, Markelz, Patra, Rabideau, Sheridan, Szyperski, Weeks, Yao, Zubrow • Includes Visualization Personnel (below) • Visualization • Pape, Anstey, Hoffman, Kesavadas, Paley

  3. User Advisory Board • Input on Hardware Requirements/Expenditures • Compute Systems (processors, memory, disk, interconnects) • Storage Systems (latency, throughput, size, backups) • Grid Infrastructure (applications, local/global access) • Visualization (compute, display, storage, frame rates) • Input on Software • General Audience (queueing, compilers, debugging, parallel) • Narrow Audience (domain specific packages) • Input on Allocation of Resources • Hardware (cycles) • Software (floating licenses) • Personnel (time) • Input on Allocation of Funds • Acquisition of Funds • Grants, Contracts, Lobbying

  4. 21st Century University • Embrace digital data-driven society • Empower students to compete in knowledge-based economy • Support research, scholarship, education, and community outreach • Deliver high-end cyberinfrastructure to enable efficient • Collection of data • Management/Organization of data • Analysis of data • Visualization of data

  5. CCR Mission Statement • In areas that require high-end computing, storage, networking (grid), and visualization: • Enable Research and Scholarship • Provide Education, Outreach and Training • Provide Technology Transfer to WNY community • In order to enable and provide critical high-end infrastructure • CCR staff must be knowledgeable of HPC • CCR staff must be involved with the HPC community • CCR staff must work at the leading edge of HPC

  6. Center for Computational Research 1999-2005 Snapshot • High-Performance Computing and High-End Visualization • ~100 Research Groups in 37 Depts • 13 Local Companies • 10 Local Institutions • External Funding ($300M+) • $169M External Funding • $18M as lead • $151M in support • $144M Vendor Donations • Total Leveraged WNY: $0.5B • Deliverables • 400+ Publications 1/2003 • Software, Media, Algorithms, Consulting, Training, CPU Cycles… Raptor Image

  7. Return on Investment 1998-2005 Millions UB’s total investment in CCR: $7M UB’s ROI: $300M White House: “Give HPC Priority” “While the importance of each networking and IT research and development program areas continues, high-end computing and cyberinfrastructure R&D should be given higher relative priority due to the potential of each in furthering progress across a broad range of scientific and technological application areas…”

  8. CCR-Supported Research at UB • Physical Sciences • Autschbach (Chem), Coppens (Chem), Errington (CBE), Furlani (CCR), Han (Physics), Jones (CCR), King (Chem), Kinney (Physics), Kofke (CBE), Lund (CBE), Markelz (Physics), Ruckenstein (CBE), Sen (Physics), Swihart (CBE), Szyperski (Chem) • Life Sciences • Almon (Biology), Andreadis (Chem Eng), Beal (CSE), DeTitta (Structural Biology), Halfon (Biochemistry), Gaile (Biostatistics), Hu (CCR), Hauptman (Structural Biology), Koffas (Chem Eng), Miller (CSE), Murphy (Medicine), Nowak (RPCI), Sullivan (Ophthalmology), Szyperski (Chem), Trevisan (Public Health), Weeks (Structural Biology), Willsky (Biochemistry), Zhang (CSE), Zhou (Physiology and Biophysics) • Engineering • Atkinson (CSEE), Aref (CSEE), Bisantz (IE), Becker (Geology), Bucher (CCR), Bursik (Geology), Cartwright (EE), Dargush (CSEE), DesJardin (MAE), Flewelling (Geography), Green (CCR), Jankovic (CSEE), Jayaraman (CSE), Jones (CCR), Llinas (IE), Madnia (MAE), Nagi (IE), Patra (MAE), Pitman (Math), Qiao (CSE), Rabideau (CSEE), Reinhorn (CSEE), Sheridan (Geology), Singh (MAE), Upadhyaya (CSE), Zubrow (Anthropology) • Scientific Visualization, Medical Imaging, Virtual Reality • Ansty (Media), Baker (Nuclear Med), Evans (Oral Bio), Geffan (Oral Bio), Hoffmann (Nuclear Med), Innus (CCR), Jones (CCR), Kesavadas (MAE), Lockwood (Neurology, Nuclear Med), Miletich (Nuclear Med), Pape (Media), Paley (Classics), Yao (Nuclear Med)

  9. Major Compute/Storage Resources • Apex Bioinformatics System • Sun V880 (3), Sun 6800 • Sun 280R (2) • Intel PIIIs • Sun 3960: 7 TB Disk Storage • UB: Off Maint & Mng Srv • HP/Compaq SAN • 75 TB Disk; 190 TB Tape • 64 Alpha Processors (400 MHz) • 32 GB RAM; 400 GB Disk • UB: Outyear Costs not Covered • Dell Linux Cluster: #187#368off • 4036 Processors (PIII 1.2 GHz) • 2TB RAM; 160TB Disk; 16TB SAN • IBM BladeCenter Cluster: #106#152 • 532 P4 Processors (2.8 GHz) • 5TB SAN • Dell Linux Cluster (Joplin) • #22#25#38#95#123 • 600 P4 Processors (2.4 GHz) • 600 GB RAM; 40 TB Disk; Myrinet • Maintenance Expires 9/2005 • SGI Altix3700 (Lennon/McCartney) • 64 Processors (1.3GHz ITF2) • 256 GB RAM • 2.5 TB Disk • SGI Intel Linux Cluster (Nash) • 150 PIII Processors (1 GHz) • Myrinet • SGI Origin3800 (Hillman) • 64 Processors (400 MHz) • 32 GB RAM; 400 GB Disk • IBM RS/6000 SP (Stills): 78 Processors • Sun Cluster (Young): 80 Processors

  10. CCR Visualization Resources Fakespace ImmersaDesk R2 Portable 3D Device Tiled-Display Wall 20 NEC projectors: 15.7M pixels Screen is 11’7’ Dell PCs with Myrinet2000 Access Grid Nodes (2) Group-to-Group Communication Commodity components SGI Reality Center 3300W Dual Barco’s on 8’4’ screen

  11. Machine Utilization 100 User Groups in 37 Departments

  12. ACDC Data Grid Overview(Grid-Available Data Repositories) 182 GB Storage 70 GB Storage Nash: Compute Cluster 75 Dual Processor 1 GHz Pentium III RedHat Linux 7.3 1.8 TB Scratch Space Joplin: Compute Cluster Mama: Compute Cluster 300 Dual Processor 2.4 GHz Intel Xeon RedHat Linux 7.3 38.7 TB Scratch Space 9 Dual Processor 1 GHz Pentium III RedHat Linux 7.3 315 GB Scratch Space 100 GB Storage ACDC: Grid Portal 4 Processor Dell 6650 1.6 GHz Intel Xeon RedHat Linux 9.0 66 GB Scratch Space 100 GB Storage 56 GB Storage Young: Compute Cluster 16 Dual Sun Blades 47 Sun Ultra5 Solaris 8 770 GB Scratch Space 136 GB Storage Crosby: Compute Cluster SGI Origin 3800 64 - 400 MHz IP35 IRIX 6.5.14m 360 GB Scratch Space Network Attached Storage 1.2 TB CSE MultiStore 40 TB Storage Area Network 75 TB

  13. ACDC-Grid Collaborations • Grid3+ Collaboration / iVDGL Member • Open Science Grid Founding Participant • Monitoring & Information Services, co-chair • Security, Tech Working Group Participant • WNY Grid Initiative • Grid-Lite • HP Labs Collaboration • Innovative Laboratory Prototype • Dell Collaboration • NE Bio-Grid • IBM Research Collaboration • MIT, Harvard • Grid-Based Visualization • SGI Collaboration

  14. CCR by the Numbers 15  13? Technical Staff Associate Director Computational Scientist (4) Database Administrator Scientific Visualization System Administration (5) Storage Area Network Admin Programmer Multimedia 3 Support Staff Financial/Contracts (2) Receptionist Annual Personnel: $1.2M Annual Operating: $0.1M Annual Expend: ~$2.4M Opportunistic Funding Model Decommissioned Crosby, Stills, Young Joplin/Nash Upgrades due 7/2003 $2.3M funds avail; not allocated SGI Altix installed 5/2004 Visualization Equipment $0.8M+ from NYS; not allocated BioACE off maintenance HP SAN available Users responsible for outyear costs Space for Viz available not allocated

  15. Thanks for agreeing to participate in CCR’s UAB!

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