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An Essay on “The Chemical Basis of Morphogenesis” written by A. Turing

An Essay on “The Chemical Basis of Morphogenesis” written by A. Turing. Yongjin Park (99328-162), Dept. of Biological Sciences. Agenda. Morphogenetic model A critique on the article Conclusion regarding complexity. Morphogenetic Model.

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An Essay on “The Chemical Basis of Morphogenesis” written by A. Turing

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  1. An Essay on “The Chemical Basis of Morphogenesis” written by A. Turing Yongjin Park (99328-162), Dept. of Biological Sciences

  2. Agenda • Morphogenetic model • A critique on the article • Conclusion regarding complexity

  3. Morphogenetic Model • Morphogenesis := morphology (shape) + genesis (development) • Chemical reagent (I.e., hormones) matters • Enzyme kinetics: velocity ∝ concentration • Osmotic pressure as driving force • Cell as a single system • Morphogen as a single unit • Units ∈ System

  4. Morphogenetic Model cont. Model organism (hydra)

  5. Morphogenetic Model cont. X Y

  6. A critique on Turing • Mathematically rigorous model but not biologically relevant. • Physical basis simultaneously contributes to the morphogenesis in more fundamental aspects. • Skeletal structures (both extra and intra) • Almost not permeable (or highly selective) cell membrane • Tightly controlled cell division cycle • Membrane tension • Cell migration (neural navigation) • A single cell is far more complex.

  7. Sui Huang &Donald E. Ingber, Nature Cell Biology1, E131 - E138 (1999)

  8. Sui Huang &Donald E. Ingber, Nature Cell Biology1, E131 - E138 (1999)

  9. MarcNeumann & MarkusAffolter, EMBO reports7, 1, 36–40 (2006)

  10. Olga C. Rodriguez et al., Nature Cell Biology5, 599 - 609 (2003)

  11. LucaTamagnone & PaoloM.Comoglio,EMBO reports5, 4, 356–361 (2004)

  12. Cellular network model X Y

  13. Conclusion • Simplicity within complexity • Oscillating chemical gradient is at the heart of biological homeostasis. • Morphogenesis or chemical computing • Chicken or egg problem • Physical complexity leads to computing structure • Network model of state machines • But even central dogma is not devised in 1950’s. • Biological state machine  DNA computing.

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