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ABCD Data Schema

A ccess to B iological C ollection D ata: Data schema for all types of primary biodiversity data (living/preserved/observational, botanical/zoological/bacterial/viral, marine/terrestrial) Used with BioCASe Provider Software (ca. 30 Mio. records provided to GBIF)

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ABCD Data Schema

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  1. Access to Biological Collection Data: Data schema for all types of primary biodiversity data (living/preserved/observational, botanical/zoological/bacterial/viral, marine/terrestrial) Used with BioCASe Provider Software (ca. 30 Mio. records provided to GBIF) XML (eXtensible Markup Language) based can be consumed by humans and machines Highly complex, hierarchical, currently 1,055 data elements almost every data item will fit in Extendable (plug-in slot for additional information) standard (currently version 2.06) ABCD Data Schema

  2. Namespace: http://www.tdwg.org/schemas/abcd/2.06 ABCD: Structure

  3. ABCD Metadata

  4. ABCD: Triple ID, Record Basis

  5. ABCD: Identification (multiple)

  6. ABCD: Gathering Event

  7. ABCD: Multimedia

  8. ABCD: Unit Associations

  9. ABCDDNA • - DNA part contains ca. 75 elements • - Unit = DNA sample • - Specimen/voucher as Associated Unit • - Already integrated in BPS 3 • - Mapping example at www.dnabank-network.org • - Namespace = • http://www.dnabank-network.org/schemas/ABCDDNA • Mapping of main specimen information together with DNA extension required for indexing • http://wiki.bgbm.org/dnabankwiki/index.php/Mapping_example

  10. DarwinCore Archives in BioCASe ABCD Web Service (ABCD 2.06, ABCDDNA) based Networks 1. Dumping: BioCASe Provider Software ABCD Archive 2. Transforming: Pentaho Data Transformation DarwinCore Archive(s) BioCASe Provider Software 3

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