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Citrus Breeding

Citrus Breeding. Kevin M. Crosby. History. Early agriculturalists selected natural hybrids and mutants for seed propagation 1800’s- grafting and cuttings became popular to propagate best varieties 1900’s- artificial cross-pollination practiced. Breeding Goals.

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Citrus Breeding

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  1. Citrus Breeding Kevin M. Crosby

  2. History • Early agriculturalists selected natural hybrids and mutants for seed propagation • 1800’s- grafting and cuttings became popular to propagate best varieties • 1900’s- artificial cross-pollination practiced

  3. Breeding Goals • Rootstock- tree size, stress tolerance • Scion- fruit color, size, shape, flavor, yield • Disease resistance- CTV, Phytophthora, CVC, Alternaria, Scab, Greening, etc.

  4. Rootstock • Dwarfing- Poncirus, some mandarins • Compatability- citrus better than Poncirus • Seedling vigor and scion yield • Fruit quality- size, shape, flavor, juice

  5. Rootstock Hybrids • ‘Carrizo,’ ‘Troyer’ Citrange- navel orange x Poncirus, very popular in FL, CA • ‘Swingle’ Citrumelo- grapefruit x Poncirus, very popular in Florida, salt intolerant • ‘Sunki’ x ‘Swingle’ tf- semi-dwarfing, salt-tolerant, possible replacement for SO in TX

  6. Carrizo Citrange

  7. Swingle Citrumelo

  8. Rootstock Fruit

  9. Scion • Vigor, yield potential, cold tolerance • Fruit type- mandarin grapefruit, orange • Fruit quality- flavor, size, seediness, appearance, shelf-life

  10. Scion Hybrids • ‘Orlando,’ ‘Minneola’ tangelos- ‘Duncan’ grapefruit x ‘Dancy’ tangerine • ‘Page’ mandarin- ‘Minneola’ x ‘Clementine’ • ‘Oro Blanco’ grapefruit triploid- tetraploid pummelo x grapefruit

  11. Disease Resistance • Viruses- CTV, Psorosis, Exocortis • Bacteria- Citrus Variegated Chlorosis, Greening, Canker • Fungi- Alternaria, Scab, Melanose, Phytophthora

  12. Breeding Techniques • Cross-pollination- combine genes from different parents in hybrid progeny • Self-pollination- fix genes of interest in one line to stabilize phenotype (inbreeding) • Mutation- natural or induced genotypic modification

  13. Cross Pollination • Combine desirable traits from different genotypes/species and exploit heterosis • Swingle- one of earliest to make extensive crosses for rootstock improvement • Many hybrid rootstocks between Poncirus and Citrus- citrange, citrumelo, citrandarin

  14. Self-pollination • Natural mechanism for species to maintain genetic uniformity- pummelo, mandarins • Serious inbreeding depression in citrus overcome by apomixis- nucellar embryony • Important for gene inheritance and function studies

  15. Seed Structure

  16. Mutation • Natural mutations- ‘sports’ of buds or limbs: ‘Ruby Red,’ most orange varieties • Gamma rays- chromosome breaks cause genotypic changes: ‘Star Ruby,’ ‘Rio Red’ • Chemical and t-DNA- interrupt single genes

  17. Population Development • Pedigree- all progeny from specific cross carefully evaluated, limited genetic base • Recurrent selection- diverse populations improved by selection and intercrossed • Mass selection- large population evaluated for a few outstanding individuals

  18. Pedigree Method • Most citrus varieties developed by this method- few crosses • Relatively few parents (monoembryonic) as females; various males • Each progeny evaluated from each family

  19. Recurrent Selection • Each population developed for important traits- good genetic diversity • Crosses between individuals from improved populations evaluated for superior traits • Most productive over long period

  20. Mass Selection • Characterized or heterogeneous populations from relatively few crosses screened • Focus mainly on quantitative traits or genes with incomplete penetrance • Labor intensive but rapid improvement

  21. Biotechnology • Protoplast fusion of different genotypes • Gene mapping with molecular markers- gene cloning. • Genetic transformation with novel genes to modify DNA- Agrobacterium, biolistics

  22. Protoplast Fusion • Isolate cell protoplasts from callus or leaf tissue and fuse in vitro to form hybrids • Mostly polyploid plants regenerated from tissue culture- genetic hybrids • Overcome barriers to sexual reproduction

  23. Gene Cloning • Mapping genes in DNA with molecular markers- RAPD, RFLP, AFLP, etc. • Chromosome walking- locate DNA markers adjacent to gene of interest, clone gene inside bacterial plasmid • cDNA cloning- isolate genes from mRNA

  24. Map-based Cloning CGTTGA- part of FR gene 120 kb BAC RFLP but no RAPD RAPD RFLP AFLP SCAR .4 .6 1 CM FINGERBLIGHT RESISTANCE GENE

  25. Genetic Transformation • Insertion of cloned gene sequence into DNA (genome) of desirable plant • Modify single trait while maintaining good attributes of parent- SO with Ctv gene • Insertion point in genome not targeted

  26. Texas Priorities • Salt and drought tolerance • CTV and Phytophthora resistance • Cold and heat tolerance • Fresh market fruit- size, sugars, low acid

  27. Past Achievements in Texas • ‘Ruby Red Grapefruit’- bud sport of Thompson in LRGV, changed market • ‘Star Ruby’- irradiated seedling of ‘Hudson,’ darkest red grapefruit • ‘Rio Red’- irradiated budwood of ‘Ruby Red,’ most popular red grapefruit today

  28. Past Achievements in California • Hybrid mandarins- ‘Kinnow,’ ‘Pixie’ • Triploid seedless grapefruit- ‘Oroblanco’ • Hybrid red pummelo- ‘Chandler’ • Rootstocks- citranges, citrumelos

  29. Past Achievements in Florida • Tangelos- ‘Orlando,’ ‘Minneola,’ ‘Page,’ • Grapefruit- ‘Marsh seedless,’ ‘Duncan’ • Tangors- ‘Murcott,’ ‘Temple,’ ‘Fallglo,’ ‘Ambersweet’

  30. Current Variety Development • New triploid, seedless mandarins- CA, FL • New salt tolerant, dwarf rootstocks- CA,TX • New low acid grapefruits- CA • New fusion product rootstocks- FL

  31. Current Molecular Research • CTV resistance gene cloning- CA,TX,FL • Low acid gene mapping- CA • Fruit development gene mapping- CA,FL • Chromosome Isolation and Fusion-TX

  32. Future Goals • CTV resistance gene in susceptible scions and rootstocks • Phytopthora resistant, salt tolerant, high yielding rootstocks • Fruit- sweeter, seedless, longer shelf life

  33. Breeding Strategy for Texas • Increase effort in transgenics development • Increase emphasis on fruit quality and earliness for fresh market expansion • Increase research into genetic cold tolerance

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