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Development of Standard Scripts for Analysis and Programming

Development of Standard Scripts for Analysis and Programming. 17 March 2014 PhUSE Computational Science Symposium Conference Summary. Refined Projects. • P01: Look for existing scripts and store them in the repository (Adrienne Bonwick and Aiyu Li) - Work on FDA scripts first

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Development of Standard Scripts for Analysis and Programming

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  1. Development of Standard Scripts for Analysis and Programming 17 March 2014 PhUSE Computational Science Symposium Conference Summary

  2. Refined Projects • P01: Look for existing scripts and store them in the repository (Adrienne Bonwick and Aiyu Li) - Work on FDA scripts first • P02: Define qualification steps for scripts in the repository (Lina Jørgensen/Dante Di Tommaso) • P03: Maintain and enhance platform (repository) for sharing scripts (Mike Carniello/HanmingTu) – Remains as is • P04: Legal ownership and issues in open source repository (Sally Cassells) – Need summary then can close

  3. Refined Projects • P05: Create templates and metadata for documenting scripts and coding practices (Jean‐Marc Ferran/Eric Sun) – • P06: Refine process for creating and editing scripts in Google Code (Kevin Kane) – Close (remaining tasks to P03) • P07: Implement and further develop communication plan for standard scripts (Dirk Spruck) – Stays as is • P08: Create white papers providing recommended display and analysis including Table, List and Figure shells (Mary Nilsson) – Stays as is We will have 6 projects remaining.

  4. ScriptathonSummary • Scriptathon – Success!!!! • 26 attendees/15 coders • 13 Scripts developed • Volunteers for the remaining scripts • Organize local and annual events

  5. Whitepaper Summary • White Papers • Great Discussion! • Six whitepapers • ECG, Vitals, Labs – Central Tendency: finalized in 2013 • ECG, Vital, Labs – Outlier/Shifts • Adverse Events • Demographics, Disposition, Medications • Hepatotoxicity • PK • One additional white paper planned to be added (QT Studies) • Look for writing support

  6. Plans for Upcoming Year • Continue to build Script Repository • Continue creating code for tables and figures as outlined in white papers • Look for other existing code sharing libraries • Continue white paper development • Consider updating the first white paper • Finalize PK white paper this month • Finalize remaining 4 white papers in 2014 • Consider additional white papers to develop • Communications • Presentations at various conferences • Implement other ideas to increase awareness

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