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National Center for Public Health Informatics

LOINC, SNOMED and HL7 Message to represent Pulsed Field Gel Electrophoresis Listeria. Oct 13th, 2011 CSTE & CDC ELR Task Force Standards Workgroup. National Center for Public Health Informatics. http://www.cdc.gov/pulsenet /. Challenges in naming PFGE patterns.

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National Center for Public Health Informatics

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  1. LOINC, SNOMED and HL7 Message to represent • Pulsed Field Gel Electrophoresis • Listeria Oct 13th, 2011 CSTE & CDC ELR Task Force Standards Workgroup National Center for Public Health Informatics

  2. http://www.cdc.gov/pulsenet/

  3. Challenges in naming PFGE patterns * PFGE patterns are images but we name the patterns in PulseNet as they are uploaded to us. * However, there are different PulseNet networks that use PFGE and it is impossible to harmonize the naming of new patterns across networks in real-time, and * The number of patterns is dynamic, i.e., constantly increasing.

  4. Brainstorming: PFGE LOINC Codes / Panel Sept 12th, 2011 – New LOINC codes have been submitted Source: APHL|PHLIP and APHL|LTIAPH terminologists (Eric Haas and Riki Merrick)

  5. Brainstorming: PFGE Example in HL7 2.5.1 message Source: APHL|PHLIP and APHL|LTIAPH terminologists (Eric Haas and Riki Merrick)

  6. Brainstorming: PFGE Example in HL7 2.5.1 message Source: APHL|PHLIP and APHL|LTIAPH terminologists (Eric Haas and Riki Merrick)

  7. Brainstorming: PFGE Example in HL7 2.5.1 message Source: APHL|PHLIP and APHL|LTIAPH terminologists (Eric Haas and Riki Merrick)

  8. Questions • E-mail: PHINVS@CDC.GOV • PhConnect Online Discussion Forum: • Link

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